CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10007362m.g
(
Citrus clementina
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Ciclev10007362m.g
T286521_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10007362m
Myb
263
299
PEMIRDFLPKVNWDQVASMYVQGRSGAECEARWLNFE
Ciclev10007362m
Myb
305
352
HNPWTVEEEKSLLLIIQEKGITDWFDIAASLGTNRTPFQCLARYQRSL
Ciclev10007362m
Myb
358
404
RREWTKEEDEQLRIAVEAYGESNWQSVASTLKGRTGTQCSNRWNKTL
Ciclev10007362m
Myb
411
457
QGRWNPDEDQRLIVATMLFGPRNWKKIAQFVPGRTQVQCRERWVNSL
Ciclev10007362m
Myb
463
507
RSEWTEQEDLRLEAAIKEHGYCWSKVASALPSRTDNQCWRRWKAL
Ciclev10007407m
Myb
188
224
PEMIRDFLPKVNWDQVASMYVQGRSGAECEARWLNFE
Ciclev10007407m
Myb
230
277
HNPWTVEEEKSLLLIIQEKGITDWFDIAASLGTNRTPFQCLARYQRSL
Ciclev10007407m
Myb
283
329
RREWTKEEDEQLRIAVEAYGESNWQSVASTLKGRTGTQCSNRWNKTL
Ciclev10007407m
Myb
336
382
QGRWNPDEDQRLIVATMLFGPRNWKKIAQFVPGRTQVQCRERWVNSL
Ciclev10007407m
Myb
388
432
RSEWTEQEDLRLEAAIKEHGYCWSKVASALPSRTDNQCWRRWKAL
Ciclev10007410m
Myb
188
224
PEMIRDFLPKVNWDQVASMYVQGRSGAECEARWLNFE
Ciclev10007410m
Myb
230
277
HNPWTVEEEKSLLLIIQEKGITDWFDIAASLGTNRTPFQCLARYQRSL
Ciclev10007410m
Myb
283
329
RREWTKEEDEQLRIAVEAYGESNWQSVASTLKGRTGTQCSNRWNKTL
Ciclev10007410m
Myb
336
382
QGRWNPDEDQRLIVATMLFGPRNWKKIAQFVPGRTQVQCRERWVNSL
Ciclev10007410m
Myb
388
432
RSEWTEQEDLRLEAAIKEHGYCWSKVASALPSRTDNQCWRRWKAL
Links
Other
Myb/SANT
family TFs
Other
Citrus clementina
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g001409m.g
Citrus sinensis
orange1.1g001409m.g
N
0.909
evm.TU.supercontig_3.430
Carica papaya
evm.TU.supercontig_3.430
N
0.685
PRUPE_ppa000733mg
Prunus persica
PRUPE_ppa000733mg
N
0.665