Ciclev10026498m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10026498m.g T286646_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.676 0.677
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.676 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10026498m Myb 15 62
Ciclev10026498m Myb 68 113

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.909
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.810
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.810
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.798
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.787
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.786
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.785
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.785
TCM_037383 Theobroma cacao TCM_037383 I 0.780
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.775
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.773
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.770
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.770
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.764
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.764
Pm005577 Prunus mume Pm005577 I 0.764
Ca_12762 Cicer arietinum Ca_12762 N 0.760
MDP0000261265 Malus domestica MDP0000261265 I 0.758
TCM_029126 Theobroma cacao TCM_029126 N 0.754
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.751
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.747
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.746
PK08631.1 Cannabis sativa PK08631.1 N 0.746
mgf018735m Mimulus guttatus mgf018735m N 0.746
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.740
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.739
Cla012784 Citrullus lanatus Cla012784 N 0.738
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.738
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.737
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.736
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.735
Pm013277 Prunus mume Pm013277 N 0.734
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.731
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.729
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.727
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.726
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.726
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.725
MDP0000931057 Malus domestica MDP0000931057 N 0.723
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.722
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.721
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.721
TCM_015933 Theobroma cacao TCM_015933 I 0.716
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.715
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.714
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.713
Pm023419 Prunus mume Pm023419 N 0.713
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.713
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.713
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.711
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.709
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.709
TCM_000535 Theobroma cacao TCM_000535 I 0.709
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.708
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.708
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.708
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.707
TCM_037379 Theobroma cacao TCM_037379 I 0.707
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.705
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.705
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.704
MDP0000124555 Malus domestica MDP0000124555 N 0.703
Pm027047 Prunus mume Pm027047 I 0.700
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.700
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.700
MDP0000226215 Malus domestica MDP0000226215 N 0.699
MDP0000253904 Malus domestica MDP0000253904 N 0.699
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.699
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.699
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.699
28226.m000839 Ricinus communis 28226.m000839 I 0.699
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.698
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.698
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.694
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.693
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.690
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.687
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.685
Pm005572 Prunus mume Pm005572 I 0.685
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.685
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.683
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.683
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.683
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.683
cassava41021.m1 Manihot esculenta cassava41021.m1 I 0.681
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.680
MDP0000133817 Malus domestica MDP0000133817 I 0.680
MDP0000143276 Malus domestica MDP0000143276 I 0.680
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.679
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.679
Carubv10026801m.g Capsella rubella Carubv10026801m.g I 0.676
MDP0000184538 Malus domestica MDP0000184538 I 0.676
Bostr.26833s0846 Boechera stricta Bostr.26833s0846 I 0.676
MYB49 Arabidopsis thaliana AT5G54230 D 0.676
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.676
fgenesh1_pm.C_scaffold_8001114 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001114 I 0.676
Thhalv10014125m.g Eutrema salsugineum Thhalv10014125m.g I 0.676
Cagra.1629s0007 Capsella grandiflora Cagra.1629s0007 I 0.676
fgenesh1_pg.C_scaffold_8001466 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001466 I 0.676
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.675
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.674
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.674
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.674
TT2 Arabidopsis thaliana AT5G35550 I 0.674
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.674
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.674
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.674
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.674
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.672
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.672
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.671
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.671
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.670
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.670
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.670
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.668
cassava3467.m1 Manihot esculenta cassava3467.m1 N 0.668
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.668
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.668
Pm027045 Prunus mume Pm027045 I 0.667
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.667
OB06G16110 Oryza brachyantha OB06G16110 I 0.666
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.666
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.666
PK05970.1 Cannabis sativa PK05970.1 I 0.666
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.666
OB03G30160 Oryza brachyantha OB03G30160 I 0.666
Pm029489 Prunus mume Pm029489 I 0.666
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.666
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.666
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.664
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.664
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.663
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.661
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.661
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.661