Ciclev10026557m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10026557m.g T286647_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HRS1
M02284_2.00 		Arabidopsis thaliana
AGATTCYN
NRGAATCT		 PBM
Weirauch et al.(2014)
pTH7118 		0.665 0.702
HRS1
M01068_2.00 		Arabidopsis thaliana
NAGATTCBNN
NNVGAATCTN		 PBM
Sullivan et al.(2014)
pTH7648 		0.665 0.702
HRS1
M07004_2.00 		Arabidopsis thaliana
NDDWWVNAAKATTCY
RGAATMTTNBWWHHN		 Dap-seq
OMalley et al.(2016)
At1g13300_col_a 		0.665 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10026557m Myb 37 88

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g048452m.g Citrus sinensis orange1.1g048452m.g I 0.909
orange1.1g016585m.g Citrus sinensis orange1.1g016585m.g I 0.691
Ciclev10031793m.g Citrus clementina Ciclev10031793m.g I 0.691
Bra016734 Brassica rapa Bra016734 I 0.676
Bo8g065380 Brassica oleracea Bo8g065380 I 0.676
GSMUA_Achr6G09870_001 Musa acuminata GSMUA_Achr6G09870_001 I 0.670
Lus10012056.g Linum usitatissimum Lus10012056.g I 0.667
Carubv10011925m.g Capsella rubella Carubv10011925m.g I 0.665
Thhalv10008054m.g Eutrema salsugineum Thhalv10008054m.g I 0.665
Bostr.13671s0116 Boechera stricta Bostr.13671s0116 I 0.665
Cagra.3501s0169 Capsella grandiflora Cagra.3501s0169 I 0.665
Bo5g015170 Brassica oleracea Bo5g015170 I 0.665
HRS1 Arabidopsis thaliana AT1G13300 D 0.665
Bra019824 Brassica rapa Bra019824 I 0.665
estExt_fgenesh1_pg.C_240109 Physcomitrella patens estExt_fgenesh1_pg.C_240109 I 0.664
GLYMA10G34780 Glycine max GLYMA10G34780 I 0.663
Gorai.007G053100 Gossypium raimondii Gorai.007G053100 I 0.662