Eucgr.A01648 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.A01648 T286728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.666 0.688
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.666 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A01648.1 Myb 15 62
Eucgr.A01648.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.723
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.708
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.708
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.708
Solyc10g083900.1 Solanum lycopersicum Solyc10g083900.1 N 0.694
PGSC0003DMG400028282 Solanum tuberosum PGSC0003DMG400028282 N 0.694
Bo8g082570 Brassica oleracea Bo8g082570 I 0.691
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.689
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.689
MTR_1g062940 Medicago truncatula MTR_1g062940 N 0.685
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.682
Bra028550 Brassica rapa Bra028550 I 0.679
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I 0.677
Bo6g067190 Brassica oleracea Bo6g067190 I 0.675
GLYMA10G06680 Glycine max GLYMA10G06680 N 0.673
OB01G54920 Oryza brachyantha OB01G54920 I 0.672
GSMUA_Achr2G19380_001 Musa acuminata GSMUA_Achr2G19380_001 I 0.670
Cucsa.238540 Cucumis sativus Cucsa.238540 I 0.670
PK10274.1 Cannabis sativa PK10274.1 I 0.669
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.669
BGIOSGA005283 Oryza indica BGIOSGA005283 I 0.669
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.669
OBART01G45730 Oryza barthii OBART01G45730 I 0.669
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.669
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.669
Cla016762 Citrullus lanatus Cla016762 I 0.666
MYB27 Arabidopsis thaliana AT3G53200 D 0.666
MDP0000183451 Malus domestica MDP0000183451 I 0.665
MDP0000133412 Malus domestica MDP0000133412 I 0.665
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.664
Lus10023918.g Linum usitatissimum Lus10023918.g N 0.664
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.662
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.662
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.661
Bra006977 Brassica rapa Bra006977 I 0.661