Eucgr.B00373 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.B00373 T286749_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WER
M11047_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.738 0.817
WER
M11048_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.738 0.817
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH

DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.676 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B00373.1 Myb 10 57
Eucgr.B00373.1 Myb 63 108

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WER Arabidopsis thaliana AT5G14750 D 0.738
MYB23 Arabidopsis thaliana AT5G40330 D 0.676
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.676
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.748
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.696
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.669
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.670
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I 0.670
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.775
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.669
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.774
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.685
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.683
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.738
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.746
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.761
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.683
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I 0.715
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.738
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.676
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.676
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.738
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.683
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.668
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I 0.783
MDP0000650225 Malus domestica MDP0000650225 I 0.822
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.696
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.803
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.792
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.733
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.738
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.676
PK16315.1 Cannabis sativa PK16315.1 I 0.672
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.712
MDP0000578193 Malus domestica MDP0000578193 I 0.805
MDP0000537324 Malus domestica MDP0000537324 I 0.715
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.676
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.684
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.785
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.783
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.671
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.671
MDP0000164048 Malus domestica MDP0000164048 I 0.707
MDP0000199965 Malus domestica MDP0000199965 I 0.673
MDP0000266683 Malus domestica MDP0000266683 I 0.735
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.661
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.666
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.688
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.673
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.809
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.772
POPTR_0015s08700 Populus trichocarpa POPTR_0015s08700 I 0.731
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.800
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.741
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.685
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.665
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.738
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.683
Bra039065 Brassica rapa Bra039065 I 0.685
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.663
GL1 Arabidopsis thaliana AT3G27920 I 0.683
Bo2g012170 Brassica oleracea Bo2g012170 I 0.738
Bo7g090950 Brassica oleracea Bo7g090950 I 0.706
Bo9g165670 Brassica oleracea Bo9g165670 I 0.721
Bra008740 Brassica rapa Bra008740 I 0.721
Bra023486 Brassica rapa Bra023486 I 0.706
Bra025311 Brassica rapa Bra025311 I 0.718
Bra025589 Brassica rapa Bra025589 I 0.676
TCM_000535 Theobroma cacao TCM_000535 I 0.666
TCM_010360 Theobroma cacao TCM_010360 I 0.673
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.723
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.818
Pm005571 Prunus mume Pm005571 I 0.679
Pm006678 Prunus mume Pm006678 I 0.741
Pm024725 Prunus mume Pm024725 I 0.845
Pm027045 Prunus mume Pm027045 I 0.680
28226.m000839 Ricinus communis 28226.m000839 I 0.684
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.818
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.696
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.676
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.663
TCM_012057 Theobroma cacao TCM_012057 I 0.840
TCM_016886 Theobroma cacao TCM_016886 I 0.748
TCM_037377 Theobroma cacao TCM_037377 I 0.691
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.703
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.707
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.675
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.683
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.663
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.688
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N 0.715
SapurV1A.1178s0040 Salix purpurea SapurV1A.1178s0040 N 0.707
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N 0.683