Eucgr.B01570 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.B01570 T286758_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.909 0.989
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.909 0.989
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD

HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B01570.1 Myb 7 53
Eucgr.B01570.1 Myb 59 103

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMXG00000002769 Astyanax mexicanus ENSAMXG00000002769 N 0.000
ENSXMAG00000003417 Xiphophorus maculatus ENSXMAG00000003417 N 0.000
ENSTRUG00000005618 Takifugu rubripes ENSTRUG00000005618 N 0.000
ZNF683 Pan troglodytes ENSPTRG00000000383 N 0.000
ENSPPYG00000001685 Pongo abelii ENSPPYG00000001685 N 0.000
ENSPFOG00000019374 Poecilia formosa ENSPFOG00000019374 N 0.000
ENSPANG00000022867 Papio anubis ENSPANG00000022867 N 0.000
ENSORLG00000012948 Oryzias latipes ENSORLG00000012948 N 0.000
ENSORLG00000010025 Oryzias latipes ENSORLG00000010025 N 0.000
ENSONIG00000013583 Oreochromis niloticus ENSONIG00000013583 N 0.000
ZNF683 Macaca mulatta ENSMMUG00000003420 N 0.000
ZNF683 Gorilla gorilla ENSGGOG00000007713 N 0.000
ZNF683 Homo sapiens ENSG00000176083 N 0.000
ENSP00000388792 Macaca fascicularis ENSP00000388792 N 0.000