Eucgr.B03417 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.B03417 T286774_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB124
M01267_2.00
Arabidopsis thaliana
NNVCGCKCBN

NVGMGCGBNN
PBM
Lambert et al.(2019)
pTH11556
0.812 0.901
MYB88
M07042_2.00
Arabidopsis thaliana
NNNHNACGCKCCDHH

DDHGGMGCGTNDNNN
Dap-seq
OMalley et al.(2016)
MYB88_col_a
0.785 0.868
MYB88
M07043_2.00
Arabidopsis thaliana
NNNACGCTCCHNN

NNDGGAGCGTNNN
Dap-seq
OMalley et al.(2016)
MYB88_colamp_a
0.785 0.868
MYB88
M11038_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB88_01
0.785 0.868
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B03417.1 Myb 21 66
Eucgr.B03417.1 Myb 72 116
Eucgr.B03417.2 Myb 21 66
Eucgr.B03417.2 Myb 72 116
Eucgr.B03417.3 Myb 21 66
Eucgr.B03417.3 Myb 72 116

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BOTBODRAFT_178020 Botryobasidium botryosum BOTBODRAFT_178020 N 0.000
PaG_00967 Pseudozyma aphidis PaG_00967 N 0.000
PAN0_066c6560 Pseudozyma antarctica PAN0_066c6560 N 0.000
PAXRUDRAFT_130614 Paxillus rubicundulus PAXRUDRAFT_130614 N 0.000
PHACADRAFT_255745 Phanerochaete carnosa PHACADRAFT_255745 N 0.000
PHLGIDRAFT_29407 Phlebiopsis gigantea PHLGIDRAFT_29407 N 0.000
PHSY_007470 Pseudozyma hubeiensis PHSY_007470 N 0.000
PILCRDRAFT_816234 Piloderma croceum PILCRDRAFT_816234 N 0.000
PLEOSDRAFT_1032392 Pleurotus ostreatus PLEOSDRAFT_1032392 N 0.000
PSEUBRA_SCAF13g01883 Pseudozyma brasiliensis PSEUBRA_SCAF13g01883 N 0.000
SCHCODRAFT_255852 Schizophyllum commune SCHCODRAFT_255852 N 0.000
SCLCIDRAFT_120465 Scleroderma citrinum SCLCIDRAFT_120465 N 0.000
SERLA73DRAFT_59903 Serpula lacrymans SERLA73DRAFT_59903 N 0.000
sr15125 Sporisorium reilianum sr15125 N 0.000
UHOR_06361 Ustilago hordei UHOR_06361 N 0.000
UM04235 Ustilago maydis UM04235 N 0.000
V565_046060 Rhizoctonia solani V565_046060 N 0.000
MVLG_04149 Microbotryum violaceum MVLG_04149 N 0.000
Moror_2743 Moniliophthora roreri Moror_2743 N 0.000
M422DRAFT_168669 Sphaerobolus stellatus M422DRAFT_168669 N 0.000
CC1G_01056 Coprinopsis cinerea CC1G_01056 N 0.000
CERSUDRAFT_113294 Ceriporiopsis subvermispora CERSUDRAFT_113294 N 0.000
DACRYDRAFT_68629 Dacryopinax sp DACRYDRAFT_68629 N 0.000
FIBRA_01643 Fibroporia radiculosa FIBRA_01643 N 0.000
FOMPIDRAFT_1038716 Fomitopsis pinicola FOMPIDRAFT_1038716 N 0.000
GALMADRAFT_251485 Galerina marginata GALMADRAFT_251485 N 0.000
GLOTRDRAFT_71665 Gloeophyllum trabeum GLOTRDRAFT_71665 N 0.000
GYMLUDRAFT_41756 Gymnopus luxurians GYMLUDRAFT_41756 N 0.000
HETIRDRAFT_471598 Heterobasidion irregulare HETIRDRAFT_471598 N 0.000
JAAARDRAFT_173841 Jaapia argillacea JAAARDRAFT_173841 N 0.000
K443DRAFT_637386 Laccaria amethystina K443DRAFT_637386 N 0.000
LACBIDRAFT_307391 Laccaria bicolor LACBIDRAFT_307391 N 0.000
M378DRAFT_167115 Amanita muscaria M378DRAFT_167115 N 0.000
M404DRAFT_122870 Pisolithus tinctorius M404DRAFT_122870 N 0.000
M408DRAFT_325955 Serendipita vermifera M408DRAFT_325955 N 0.000
M413DRAFT_15021 Hebeloma cylindrosporum M413DRAFT_15021 N 0.000
estExt_Genewise1Plus.C_20226 Heterobasidion annosum estExt_Genewise1Plus.C_20226 N 0.000