Eucgr.C00725 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.C00725 T286788_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.673 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00725.1 Myb 17 64
Eucgr.C00725.1 Myb 70 115
Eucgr.C00725.2 Myb 17 64
Eucgr.C00725.2 Myb 70 115

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.888
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.881
TCM_037383 Theobroma cacao TCM_037383 I 0.853
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.846
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.843
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.843
MDP0000261265 Malus domestica MDP0000261265 I 0.839
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.837
Pm005577 Prunus mume Pm005577 I 0.837
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.832
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.819
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.816
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.812
Cla012784 Citrullus lanatus Cla012784 N 0.812
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.811
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.803
MDP0000124555 Malus domestica MDP0000124555 N 0.799
Pm013277 Prunus mume Pm013277 N 0.799
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.798
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.798
MDP0000931057 Malus domestica MDP0000931057 N 0.797
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.796
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.793
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.792
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.790
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.789
mgf018735m Mimulus guttatus mgf018735m N 0.789
TCM_029126 Theobroma cacao TCM_029126 N 0.788
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.787
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.787
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.784
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.777
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.774
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.774
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.772
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.772
TCM_015933 Theobroma cacao TCM_015933 I 0.772
Pm023419 Prunus mume Pm023419 N 0.769
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.769
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.769
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.769
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.768
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.767
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.767
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.765
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.764
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.764
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.764
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.759
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.756
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.756
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.755
Ca_12762 Cicer arietinum Ca_12762 N 0.755
MDP0000226215 Malus domestica MDP0000226215 N 0.755
MDP0000253904 Malus domestica MDP0000253904 N 0.755
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.753
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.753
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.750
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.748
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.743
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.741
MDP0000133817 Malus domestica MDP0000133817 I 0.736
MDP0000143276 Malus domestica MDP0000143276 I 0.736
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.731
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.730
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.727
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.727
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.724
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.716
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.714
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.714
F775_19148 Aegilops tauschii F775_19148 I 0.714
F775_17212 Aegilops tauschii F775_17212 I 0.712
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.711
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.711
TCM_037379 Theobroma cacao TCM_037379 I 0.710
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.708
PK08631.1 Cannabis sativa PK08631.1 N 0.708
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.705
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.702
MDP0000887107 Malus domestica MDP0000887107 I 0.702
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.701
MDP0000140609 Malus domestica MDP0000140609 I 0.699
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.698
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.698
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.698
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.695
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.695
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.694
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.694
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.693
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.693
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.693
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.693
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.693
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.692
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.692
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.691
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.691
Pm027048 Prunus mume Pm027048 I 0.691
Pm005573 Prunus mume Pm005573 I 0.691
Pm005572 Prunus mume Pm005572 I 0.688
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.688
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.688
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.688
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.686
28226.m000839 Ricinus communis 28226.m000839 I 0.684
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.684
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.684
PK05970.1 Cannabis sativa PK05970.1 I 0.681
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.681
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.681
cassava2597.m1 Manihot esculenta cassava2597.m1 I 0.679
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.678
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.675
POPTR_0004s08650 Populus trichocarpa POPTR_0004s08650 I 0.674
Bra001202 Brassica rapa Bra001202 I 0.673
Pm027047 Prunus mume Pm027047 I 0.673
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.673
MYB108 Arabidopsis lyrata fgenesh2_kg.3__656__AT3G06490.1 I 0.673
Bostr.2570s0008 Boechera stricta Bostr.2570s0008 I 0.673
Bra040274 Brassica rapa Bra040274 I 0.673
Bra029582 Brassica rapa Bra029582 I 0.673
Bo1g147890 Brassica oleracea Bo1g147890 I 0.673
Bo3g060620 Brassica oleracea Bo3g060620 I 0.673
MYB108 Arabidopsis thaliana AT3G06490 D 0.673
Bo5g143460 Brassica oleracea Bo5g143460 I 0.673
Cagra.9553s0006 Capsella grandiflora Cagra.9553s0006 I 0.673
Carubv10014195m.g Capsella rubella Carubv10014195m.g I 0.673
TCM_019261 Theobroma cacao TCM_019261 I 0.671
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.670
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.669
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.669
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.668
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.667
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.667
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.667
F775_42516 Aegilops tauschii F775_42516 I 0.665
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.665
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.665
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.664
Si004316m.g Setaria italica Si004316m.g I 0.663
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.663
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.662
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.662
MDP0000159011 Malus domestica MDP0000159011 I 0.662
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.662
Thhalv10004588m.g Eutrema salsugineum Thhalv10004588m.g I 0.661
PK11717.1 Cannabis sativa PK11717.1 I 0.661
Bra010021 Brassica rapa Bra010021 I 0.661
Bra010022 Brassica rapa Bra010022 I 0.661
OB03G30160 Oryza brachyantha OB03G30160 I 0.661
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.661
Bo7g092890 Brassica oleracea Bo7g092890 I 0.661
Gorai.011G203900 Gossypium raimondii Gorai.011G203900 I 0.661
TCM_021433 Theobroma cacao TCM_021433 I 0.661
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.661
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.661
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.661
OB06G16110 Oryza brachyantha OB06G16110 I 0.661