CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.C00725
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.C00725
T286788_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.673
0.656
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.C00725.1
Myb
17
64
RGAWTAEEDQKLAQVIETHGPRRWKLVAAKAGLNRCGKSCRLRWLNYL
Eucgr.C00725.1
Myb
70
115
RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSRL
Eucgr.C00725.2
Myb
17
64
RGAWTAEEDQKLAQVIETHGPRRWKLVAAKAGLNRCGKSCRLRWLNYL
Eucgr.C00725.2
Myb
70
115
RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSRL
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy