Eucgr.D00040 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.D00040 T286810_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.696 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D00040.1 Myb 18 65
Eucgr.D00040.1 Myb 71 116

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.902
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.833
Eucgr.I00828 Eucalyptus grandis Eucgr.I00828 N 0.807
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.801
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.799
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.782
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.777
MDP0000289283 Malus domestica MDP0000289283 I 0.769
MDP0000131822 Malus domestica MDP0000131822 I 0.768
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.757
TCM_030020 Theobroma cacao TCM_030020 I 0.754
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.754
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.749
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.748
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.744
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.742
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.739
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.738
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.735
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.726
Pm009880 Prunus mume Pm009880 N 0.726
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.724
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.723
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.720
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.720
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.720
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.717
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.715
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.715
TCM_007865 Theobroma cacao TCM_007865 I 0.714
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.712
TCM_033016 Theobroma cacao TCM_033016 N 0.710
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.709
MDP0000155426 Malus domestica MDP0000155426 I 0.708
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.705
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.704
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.704
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.702
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.702
TCM_007868 Theobroma cacao TCM_007868 I 0.698
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.698
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.698
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.697
Cagra.1225s0085 Capsella grandiflora Cagra.1225s0085 I 0.696
Carubv10007810m.g Capsella rubella Carubv10007810m.g I 0.696
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.696
Bostr.7867s0646 Boechera stricta Bostr.7867s0646 I 0.696
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.695
Ciclev10018311m.g Citrus clementina Ciclev10018311m.g I 0.694
Ciclev10017435m.g Citrus clementina Ciclev10017435m.g I 0.694
TCM_033015 Theobroma cacao TCM_033015 N 0.693
AtMYB41 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001108 I 0.692
29933.m001454 Ricinus communis 29933.m001454 N 0.692
orange1.1g042846m.g Citrus sinensis orange1.1g042846m.g I 0.690
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.689
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.688
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.688
MDP0000407613 Malus domestica MDP0000407613 N 0.688
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.688
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.688
Pm015302 Prunus mume Pm015302 N 0.687
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.687
Cucsa.148040 Cucumis sativus Cucsa.148040 I 0.684
Cla007838 Citrullus lanatus Cla007838 I 0.684
TCM_026197 Theobroma cacao TCM_026197 I 0.683
PGSC0003DMG400026628 Solanum tuberosum PGSC0003DMG400026628 I 0.681
Solyc10g008700.1 Solanum lycopersicum Solyc10g008700.1 I 0.681
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.680
Bra026281 Brassica rapa Bra026281 I 0.679
Thhalv10027463m.g Eutrema salsugineum Thhalv10027463m.g I 0.679
Bra024224 Brassica rapa Bra024224 I 0.679
Bo7g111870 Brassica oleracea Bo7g111870 I 0.679
Bo1g051220 Brassica oleracea Bo1g051220 I 0.679
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.678
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.677
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.677
Cla019747 Citrullus lanatus Cla019747 I 0.677
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.676
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.676
PK24260.1 Cannabis sativa PK24260.1 N 0.675
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.675
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.674
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.673
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.673
PGSC0003DMG400018331 Solanum tuberosum PGSC0003DMG400018331 I 0.672
Solyc07g054840.2 Solanum lycopersicum Solyc07g054840.2 I 0.672
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.672
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.668
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.668
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.667
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.666
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.666
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.664
PK20358.1 Cannabis sativa PK20358.1 I 0.664
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.664
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.661
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.661
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.661
Solyc03g093940.1 Solanum lycopersicum Solyc03g093940.1 N 0.661