CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.D00044
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.D00044
T286812_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.D00044.1
Myb
18
65
KGAWSAEEDQKLVAYIKRYGIWNWTHMAEPAGLARTGKSCRLRWMNYL
Eucgr.D00044.1
Myb
71
116
HGNITQEEEEIIINLHRVLGNRWASIASRLSGRTDNEIKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.D00042
Eucalyptus grandis
Eucgr.D00042
I
0.840
Eucgr.D00040
Eucalyptus grandis
Eucgr.D00040
I
0.833
Eucgr.I00828
Eucalyptus grandis
Eucgr.I00828
N
0.810
Eucgr.L02563
Eucalyptus grandis
Eucgr.L02563
N
0.793
Eucgr.D00037
Eucalyptus grandis
Eucgr.D00037
N
0.768
Eucgr.D00050
Eucalyptus grandis
Eucgr.D00050
N
0.752
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
0.722
MDP0000289283
Malus domestica
MDP0000289283
I
0.717
TCM_030020
Theobroma cacao
TCM_030020
I
0.717
SapurV1A.0028s0640
Salix purpurea
SapurV1A.0028s0640
N
0.716
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.715
Gorai.011G021300
Gossypium raimondii
Gorai.011G021300
N
0.714
Gorai.010G148300
Gossypium raimondii
Gorai.010G148300
N
0.711
gene30736-v1.0-hybrid
Fragaria vesca
gene30736-v1.0-hybrid
N
0.711
MDP0000131822
Malus domestica
MDP0000131822
I
0.698
29933.m001454
Ricinus communis
29933.m001454
N
0.689
evm.TU.supercontig_27.156
Carica papaya
evm.TU.supercontig_27.156
N
0.688
POPTR_0011s04020
Populus trichocarpa
POPTR_0011s04020
N
0.688
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.684
POPTR_0004s02570
Populus trichocarpa
POPTR_0004s02570
I
0.682
PRUPE_ppa015081mg
Prunus persica
PRUPE_ppa015081mg
N
0.681
Pm009880
Prunus mume
Pm009880
N
0.681
cassava5261.m1
Manihot esculenta
cassava5261.m1
N
0.673
cassava5263.m1
Manihot esculenta
cassava5263.m1
N
0.672
Gorai.013G143000
Gossypium raimondii
Gorai.013G143000
N
0.670
TCM_007868
Theobroma cacao
TCM_007868
I
0.670
Gorai.013G143100
Gossypium raimondii
Gorai.013G143100
N
0.669
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.668
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
0.667
TCM_033015
Theobroma cacao
TCM_033015
N
0.665
Gorai.013G143200
Gossypium raimondii
Gorai.013G143200
I
0.663
TCM_033016
Theobroma cacao
TCM_033016
N
0.661
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
0.661
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.661