Eucgr.D01346 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.D01346 T286818_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.713 0.787
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN

NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.709 0.787
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.709 0.766
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.709 0.766
PK05732.1
M01276_2.00
Cannabis sativa
HNATTCBNN

NNVGAATND
PBM
Lambert et al.(2019)
pTH11367
0.698 0.723
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB

VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.689 0.702
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD

HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.689 0.702
PHL1
M02310_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7122
0.679 0.681
PHL1
M07132_2.00
Arabidopsis thaliana
MDRGAATATTCBNWN

NWNVGAATATTCYHK
Dap-seq
OMalley et al.(2016)
At5g29000_col_a
0.679 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D01346.1 Myb 27 78

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

Invalid Input OrderBy

357 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action