Eucgr.E00261 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.E00261 T286838_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.672 0.731
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.672 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E00261.1 Myb 18 65
Eucgr.E00261.1 Myb 71 116

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0011s12750 Populus trichocarpa POPTR_0011s12750 I 0.720
SapurV1A.4146s0010 Salix purpurea SapurV1A.4146s0010 I 0.699
SapurV1A.0495s0050 Salix purpurea SapurV1A.0495s0050 I 0.699
Gorai.002G077200 Gossypium raimondii Gorai.002G077200 I 0.698
Ciclev10009050m.g Citrus clementina Ciclev10009050m.g I 0.698
orange1.1g045387m.g Citrus sinensis orange1.1g045387m.g I 0.698
TCM_031294 Theobroma cacao TCM_031294 I 0.698
POPTR_0019s07760 Populus trichocarpa POPTR_0019s07760 I 0.695
Eucgr.K00077 Eucalyptus grandis Eucgr.K00077 I 0.687
SapurV1A.0840s0010 Salix purpurea SapurV1A.0840s0010 I 0.685
MYB49 Vitis vinifera VIT_19s0014g03820 I 0.685
POPTR_0001s41920 Populus trichocarpa POPTR_0001s41920 I 0.685
MDP0000144751 Malus domestica MDP0000144751 I 0.681
Cucsa.318610 Cucumis sativus Cucsa.318610 I 0.681
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.680
Bra021382 Brassica rapa Bra021382 I 0.672
Bostr.19046s0006 Boechera stricta Bostr.19046s0006 I 0.672
MYB107 Arabidopsis thaliana AT3G02940 D 0.672
Bo1g155040 Brassica oleracea Bo1g155040 I 0.672
Cagra.1194s0007 Capsella grandiflora Cagra.1194s0007 I 0.672
Bra032028 Brassica rapa Bra032028 I 0.672
GLYMA01G06192 Glycine max GLYMA01G06192 I 0.672
MYB107 Arabidopsis lyrata fgenesh2_kg.3__241__AT3G02940.1 I 0.672
Thhalv10022405m.g Eutrema salsugineum Thhalv10022405m.g I 0.672
Carubv10016434m.g Capsella rubella Carubv10016434m.g I 0.672
Pm011657 Prunus mume Pm011657 I 0.671
PRUPE_ppa021577mg Prunus persica PRUPE_ppa021577mg I 0.671
GSMUA_AchrUn_randomG02890_001 Musa acuminata GSMUA_AchrUn_randomG02890_001 I 0.670
Gorai.003G183700 Gossypium raimondii Gorai.003G183700 I 0.669
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.668
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.668
Bo5g150350 Brassica oleracea Bo5g150350 I 0.667
GLYMA09G33870 Glycine max GLYMA09G33870 I 0.667
Pavir.Aa00510 Panicum virgatum Pavir.Aa00510 I 0.666
Pavir.J03585 Panicum virgatum Pavir.J03585 I 0.666
gene30024-v1.0-hybrid Fragaria vesca gene30024-v1.0-hybrid I 0.665
Bra024368 Brassica rapa Bra024368 I 0.664
Ca_11494 Cicer arietinum Ca_11494 I 0.664
Cla013211 Citrullus lanatus Cla013211 I 0.664
Thhalv10014050m.g Eutrema salsugineum Thhalv10014050m.g I 0.663
Bo3g012180 Brassica oleracea Bo3g012180 I 0.663
AtMYB9 Arabidopsis thaliana AT5G16770 I 0.663
Bra006370 Brassica rapa Bra006370 I 0.663
GSMUA_Achr2G04730_001 Musa acuminata GSMUA_Achr2G04730_001 I 0.663
Cagra.0434s0044 Capsella grandiflora Cagra.0434s0044 I 0.663
Carubv10002573m.g Capsella rubella Carubv10002573m.g I 0.663
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.662
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.662
Solyc08g076710.2 Solanum lycopersicum Solyc08g076710.2 I 0.662
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.662
30054.m000809 Ricinus communis 30054.m000809 I 0.662