Eucgr.G03029 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.G03029 T286894_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G11280
M01075_2.00
Arabidopsis thaliana
NNTTATCNNN

NNNGATAANN
PBM
Sullivan et al.(2014)
pTH7245
0.683 0.763
AT3G11280
M07074_2.00
Arabidopsis thaliana
DWDWDGATAAKRWW

WWYMTTATCHWHWH
Dap-seq
OMalley et al.(2016)
At3g11280_col_a
0.683 0.763
AT3G11280
M07075_2.00
Arabidopsis thaliana
NNWNNDGATAAGRWHDNN

NNHDWYCTTATCHNNWNN
Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a
0.683 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G03029.1 Myb 116 163

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I 0.715
orange1.1g023196m.g Citrus sinensis orange1.1g023196m.g I 0.713
TCM_042604 Theobroma cacao TCM_042604 I 0.711
Lus10009884.g Linum usitatissimum Lus10009884.g I 0.700
Ciclev10032309m.g Citrus clementina Ciclev10032309m.g I 0.696
Bostr.19424s1061 Boechera stricta Bostr.19424s1061 I 0.694
Cagra.1655s0043 Capsella grandiflora Cagra.1655s0043 I 0.694
Carubv10014411m.g Capsella rubella Carubv10014411m.g I 0.694
Cla004397 Citrullus lanatus Cla004397 I 0.689
Solyc05g052610.2 Solanum lycopersicum Solyc05g052610.2 I 0.687
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.687
fgenesh2_kg.3__1170__AT3G11280.1 Arabidopsis lyrata fgenesh2_kg.3__1170__AT3G11280.1 I 0.683
AT3G11280 Arabidopsis thaliana AT3G11280 D 0.683
29610.m000410 Ricinus communis 29610.m000410 I 0.681
Ca_12513 Cicer arietinum Ca_12513 I 0.673
evm.TU.supercontig_19.216 Carica papaya evm.TU.supercontig_19.216 I 0.671
GLYMA02G42140 Glycine max GLYMA02G42140 I 0.671
GLYMA14G06750 Glycine max GLYMA14G06750 I 0.671
cassava26873.m1 Manihot esculenta cassava26873.m1 I 0.670
VIT_13s0019g03370 Vitis vinifera VIT_13s0019g03370 I 0.670
Bra034173 Brassica rapa Bra034173 I 0.668
Bo1g141120 Brassica oleracea Bo1g141120 I 0.668
Bra034853 Brassica rapa Bra034853 I 0.668
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.667
Cla013553 Citrullus lanatus Cla013553 I 0.667
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I 0.663
GLYMA11G34930 Glycine max GLYMA11G34930 I 0.662
GLYMA18G03430 Glycine max GLYMA18G03430 I 0.662
Lus10014837.g Linum usitatissimum Lus10014837.g I 0.661