Eucgr.H00907 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.H00907 T286901_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.761 0.806
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.728 0.796
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.728 0.796
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.703 0.753
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.703 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.H00907.1 Myb 22 69
Eucgr.H00907.1 Myb 75 120

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

494 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I 0.000
PV04_10508 Capronia semiimmersa PV04_10508 N 0.000
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I 0.000
PV06_08608 Exophiala oligosperma PV06_08608 N 0.000
PV05_08196 Exophiala xenobiotica PV05_08196 N 0.000
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I 0.000
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I 0.000
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I 0.000
Kwal_9688 Kluyveromyces waltii Kwal_9688 I 0.000
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I 0.000
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I 0.000
SU7_2431 Saccharomyces arboricola SU7_2431 I 0.000
18194_YML099C Saccharomyces bayanus 18194_YML099C I 0.000
ARG81 Saccharomyces cerevisiae YML099C D 0.000
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I 0.000
16040_YML099C Saccharomyces mikatae 16040_YML099C I 0.000
17710_YML099C Saccharomyces paradoxus 17710_YML099C I 0.000
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I 0.000
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I 0.000
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I 0.000
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I 0.000
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I 0.000