Eucgr.J00189 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.J00189 T286931_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY

RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.685 0.827
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.685 0.802
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN

NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.685 0.802
MYB73
M07114_2.00
Arabidopsis thaliana
TAACBGWHWHW

WDWDWCVGTTA
Dap-seq
OMalley et al.(2016)
MYB73_col_a
0.680 0.778
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.668 0.741
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.668 0.741
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.668 0.741
F3A4.140
M02299_2.00
Arabidopsis thaliana
YAACBGYY

RRCVGTTR
PBM
Weirauch et al.(2014)
pTH7112
0.663 0.765
F3A4.140
M07095_2.00
Arabidopsis thaliana
TAACBGYHWHNNHNN

NNDNNDWDRCVGTTA
Dap-seq
OMalley et al.(2016)
MYB77_col_a
0.663 0.765
F3A4.140
M07096_2.00
Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV

BKTWWDWTASGGTTRCGGTT
Dap-seq
OMalley et al.(2016)
MYB77_colamp_a
0.663 0.765
F3A4.140
M02701_2.00
Arabidopsis thaliana
SYAACYGYCVHBN

NVDBGRCRGTTRS
SELEX
Mathelier et al.(2014)
MA0575.1
0.663 0.765
F3A4.140
M11044_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB77_01
0.663 0.765
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J00189.1 Myb 1 35
Eucgr.J00189.1 Myb 41 86

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29814.m000736 Ricinus communis 29814.m000736 I 0.783
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.777
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.765
Cla004431 Citrullus lanatus Cla004431 I 0.765
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.764
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.759
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.758
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.758
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.753
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.750
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.744
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.744
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.744
Pm018951 Prunus mume Pm018951 I 0.742
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.740
MDP0000298689 Malus domestica MDP0000298689 I 0.733
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.733
TCM_042474 Theobroma cacao TCM_042474 I 0.726
mgf020432m Mimulus guttatus mgf020432m I 0.721
PK01153.1 Cannabis sativa PK01153.1 I 0.721
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.719
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.716
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.715
Ca_01522 Cicer arietinum Ca_01522 I 0.715
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.711
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.709
Ca_02182 Cicer arietinum Ca_02182 I 0.705
PK17282.1 Cannabis sativa PK17282.1 I 0.705
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.705
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.702
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.702
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.702
Ca_12468 Cicer arietinum Ca_12468 I 0.702
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.702
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.702
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.702
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.702
TCM_000696 Theobroma cacao TCM_000696 I 0.702
29970.m000987 Ricinus communis 29970.m000987 I 0.702
30170.m013698 Ricinus communis 30170.m013698 I 0.702
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.702
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.702
Cla020946 Citrullus lanatus Cla020946 I 0.702
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.702
Pm005332 Prunus mume Pm005332 I 0.702
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.702
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.702
MDP0000196986 Malus domestica MDP0000196986 I 0.702
MDP0000232454 Malus domestica MDP0000232454 I 0.702
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.702
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.702
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.702
MDP0000463846 Malus domestica MDP0000463846 I 0.702
Bo3g153550 Brassica oleracea Bo3g153550 I 0.700
MDP0000275800 Malus domestica MDP0000275800 I 0.698
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.697
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.697
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.697
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.697
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.696
mgf014089m Mimulus guttatus mgf014089m I 0.696
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.696
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I 0.695
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I 0.695
Carubv10023414m.g Capsella rubella Carubv10023414m.g I 0.695
TCM_007138 Theobroma cacao TCM_007138 I 0.695
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.695
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.695
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.695
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.692
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.692
Cla006872 Citrullus lanatus Cla006872 I 0.692
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.691
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.691
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.691
evm.TU.supercontig_19.155 Carica papaya evm.TU.supercontig_19.155 I 0.689
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.688
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I 0.688
Bra010593 Brassica rapa Bra010593 I 0.687
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.685
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.685
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.685
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.685
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.685
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.685
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.685
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.685
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.685
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.685
30170.m013927 Ricinus communis 30170.m013927 I 0.685
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.685
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.685
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.685
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.685
PK28565.1 Cannabis sativa PK28565.1 D 0.685
Cla014191 Citrullus lanatus Cla014191 I 0.685
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.685
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.685
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.685
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.685
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.685
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.685
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.685
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.685
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.685
Bo4g025810 Brassica oleracea Bo4g025810 I 0.684
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.683
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.683
Bo4g151410 Brassica oleracea Bo4g151410 I 0.683
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.681
MYB73 Arabidopsis thaliana AT4G37260 D 0.680
Bra011749 Brassica rapa Bra011749 I 0.680
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.680
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.680
MYB109 Arabidopsis thaliana AT3G55730 I 0.680
Bo1g004900 Brassica oleracea Bo1g004900 I 0.680
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.680
Bra005006 Brassica rapa Bra005006 I 0.679
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.678
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.678
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.678
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.678
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.678
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.678
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.677
MYB25 Arabidopsis thaliana AT2G39880 I 0.677
Bo2g167960 Brassica oleracea Bo2g167960 I 0.677
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.675
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.674
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.674
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.673
OB01G46120 Oryza brachyantha OB01G46120 I 0.673
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.673
MDP0000641708 Malus domestica MDP0000641708 I 0.672
MDP0000823270 Malus domestica MDP0000823270 I 0.672
MDP0000784297 Malus domestica MDP0000784297 I 0.672
MDP0000477900 Malus domestica MDP0000477900 I 0.672
MDP0000480596 Malus domestica MDP0000480596 I 0.672
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.671
mgf023922m Mimulus guttatus mgf023922m I 0.671
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.670
Bra007186 Brassica rapa Bra007186 I 0.670
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.669
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.668
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.668
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.668
Bra012149 Brassica rapa Bra012149 I 0.668
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.668
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.668
Bo7g063830 Brassica oleracea Bo7g063830 I 0.668
MYB44 Arabidopsis thaliana AT5G67300 D 0.668
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.667
Pm005220 Prunus mume Pm005220 I 0.667
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.667
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.667
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.667
Cucsa.073130 Cucumis sativus Cucsa.073130 I 0.667
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I 0.667
MDP0000894463 Malus domestica MDP0000894463 I 0.667
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.666
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.664
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.664
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I 0.663
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I 0.663
Carubv10019440m.g Capsella rubella Carubv10019440m.g I 0.663
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I 0.663
Bo8g079430 Brassica oleracea Bo8g079430 I 0.663
F3A4.140 Arabidopsis thaliana AT3G50060 D 0.663
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.661
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.661
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.661
Bo8g090160 Brassica oleracea Bo8g090160 I 0.661
Cla022947 Citrullus lanatus Cla022947 I 0.661
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I 0.661
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.661
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.661
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I 0.661