CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.J02817
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.J02817
T286960_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GRMZM2G005066
M11056_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.675
0.731
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY
RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.665
0.720
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.665
0.720
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.J02817.1
Myb
14
61
KGAWSAEEDEVLINYVKIHGEGKWRRVAQNAGLNRCAKSCRLRWLNYL
Eucgr.J02817.1
Myb
67
112
RGDITEEEEDLIIRLHRLLGNRWALIAGRLPGRTDNEIKNYWNTTL
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
251 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy