Eucgr.K02966 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.K02966 T286990_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH

DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.853 0.894
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN

NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.832 0.915
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.799 0.851
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.799 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02966.1 Myb 76 127
Eucgr.K02966.2 Myb 76 127

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

447 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30138.m004006 Ricinus communis 30138.m004006 N 0.000
Bo7g081200 Brassica oleracea Bo7g081200 N 0.000
Bo8g065710 Brassica oleracea Bo8g065710 N 0.000
Bra016722 Brassica rapa Bra016722 N 0.000
Bra026876 Brassica rapa Bra026876 N 0.000
Bra041096 Brassica rapa Bra041096 N 0.000
BRADI4G40450 Brachypodium distachyon BRADI4G40450 N 0.000
Carubv10009267m.g Capsella rubella Carubv10009267m.g N 0.000
Ciclev10019841m.g Citrus clementina Ciclev10019841m.g N 0.000
GRMZM2G100431 Zea mays GRMZM2G100431 N 0.000
Pavir.Ia04672 Panicum virgatum Pavir.Ia04672 N 0.000
Pavir.Ib02072 Panicum virgatum Pavir.Ib02072 N 0.000
Pavir.J38487 Panicum virgatum Pavir.J38487 N 0.000
Pm015999 Prunus mume Pm015999 N 0.000
POPTR_0004s11750 Populus trichocarpa POPTR_0004s11750 N 0.000
Sb01g032240 Sorghum bicolor Sb01g032240 N 0.000
Si035368m.g Setaria italica Si035368m.g N 0.000
Si038913m.g Setaria italica Si038913m.g N 0.000
Thhalv10005386m.g Eutrema salsugineum Thhalv10005386m.g N 0.000