CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.K03133
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.K03133
T286993_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.755
0.843
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.718
0.779
Q948S6_TOBAC
M11075_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA1_01
0.687
0.736
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.K03133.1
Myb
64
110
KGGWTPEEDETLRNAVAVYNGKSWKKIAEHFPDRSEVQCLHRWQKVL
Eucgr.K03133.1
Myb
116
162
KGPWTQEEDDKIIDLVSRYGPTKWSLIAKSLPGRIGKQCRERWHNHL
Eucgr.K03133.1
Myb
168
213
KEAWTLEEELALMQAHRVNGNKWAEIAKVLPGRTDNSIKNHWNSSL
Eucgr.K03133.2
Myb
64
110
KGGWTPEEDETLRNAVAVYNGKSWKKIAEHFPDRSEVQCLHRWQKVL
Eucgr.K03133.2
Myb
116
162
KGPWTQEEDDKIIDLVSRYGPTKWSLIAKSLPGRIGKQCRERWHNHL
Eucgr.K03133.2
Myb
168
213
KEAWTLEEELALMQAHRVNGNKWAEIAKVLPGRTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
100 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy