evm.TU.supercontig_108.29 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_108.29 T287032_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB118
M07087_2.00
Arabidopsis thaliana
DHWDHRDMCGTTACDWW

WWHGTAACGKHYDHWDH
Dap-seq
OMalley et al.(2016)
MYB118_col_a
0.733 0.827
MYB118
M07088_2.00
Arabidopsis thaliana
DWWWYGTAACGKHYR

YRDMCGTTACRWWWH
Dap-seq
OMalley et al.(2016)
MYB118_colamp_a
0.733 0.827
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_108.29 Myb 232 266
evm.model.supercontig_108.29 Myb 272 317

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
Ca_22941 Cicer arietinum Ca_22941 N 0.000
Cucsa.157080 Cucumis sativus Cucsa.157080 N 0.000
Eucgr.G01052 Eucalyptus grandis Eucgr.G01052 N 0.000
Eucgr.G01047 Eucalyptus grandis Eucgr.G01047 N 0.000
Eucgr.K02205 Eucalyptus grandis Eucgr.K02205 N 0.000
Eucgr.G01049 Eucalyptus grandis Eucgr.G01049 N 0.000
Eucgr.G01053 Eucalyptus grandis Eucgr.G01053 N 0.000
gene01364-v1.0-hybrid Fragaria vesca gene01364-v1.0-hybrid N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
LPERR08G18520 Leersia perrieri LPERR08G18520 N 0.000
Lus10032004.g Linum usitatissimum Lus10032004.g N 0.000
mgf006124m Mimulus guttatus mgf006124m N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000
OBART08G21800 Oryza barthii OBART08G21800 N 0.000
OB09G22520 Oryza brachyantha OB09G22520 N 0.000
ORGLA08G0227400 Oryza glaberrima ORGLA08G0227400 N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
OGLUM08G23090 Oryza glumaepatula OGLUM08G23090 N 0.000
BGIOSGA029063 Oryza indica BGIOSGA029063 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
OLONG_020119 Oryza longistaminata OLONG_020119 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
OMERI06G13840 Oryza meridionalis OMERI06G13840 N 0.000
ONIVA08G24840 Oryza nivara ONIVA08G24840 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.000
OPUNC08G19870 Oryza punctata OPUNC08G19870 N 0.000
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.000
ORUFI08G24230 Oryza rufipogon ORUFI08G24230 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
OS08G0535800 Oryza sativa OS08G0535800 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
Si014408m.g Setaria italica Si014408m.g N 0.000
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N 0.000
GRMZM2G054252 Zea mays GRMZM2G054252 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000