CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_18.11
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_18.11
T287076_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.728
0.839
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.704
0.839
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_18.11
Myb
14
61
KGRWTAEEDEKLTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWMNYL
evm.model.supercontig_18.11
Myb
67
112
RGSITAEEEELIVKLPTTLGNRWSLIVSHLPGRTDNEIKNYWNCHL
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_004777
Theobroma cacao
TCM_004777
I
0.809
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.799
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.796
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.782
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.775
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.772
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.772
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.772
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.770
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.769
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.768
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.768
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.766
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.765
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.761
evm.TU.supercontig_9.95
Carica papaya
evm.TU.supercontig_9.95
I
0.761
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.761
Cla009418
Citrullus lanatus
Cla009418
I
0.761
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.758
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.757
OPUNC03G13890
Oryza punctata
OPUNC03G13890
I
0.756
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.755
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.753
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.752
F775_11235
Aegilops tauschii
F775_11235
I
0.750
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.750
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.750
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.750
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.750
Eucgr.A00200
Eucalyptus grandis
Eucgr.A00200
I
0.750
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.749
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.749
Bra000453
Brassica rapa
Bra000453
I
0.749
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.749
Traes_1DS_711044AD5
Triticum aestivum
Traes_1DS_711044AD5
I
0.746
ATMYB11
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002710
I
0.746
Cla022107
Citrullus lanatus
Cla022107
I
0.745
MYB12
Arabidopsis lyrata
fgenesh2_kg.4__2983__AT2G47460.1
I
0.745
MYB12
Arabidopsis thaliana
AT2G47460
I
0.745
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.744
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.743
TCM_021318
Theobroma cacao
TCM_021318
I
0.742
Bostr.13158s0261
Boechera stricta
Bostr.13158s0261
I
0.742
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.741
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.741
mgf003233m
Mimulus guttatus
mgf003233m
I
0.740
Bo3g039690
Brassica oleracea
Bo3g039690
I
0.740
ONIVA03G15280
Oryza nivara
ONIVA03G15280
I
0.739
ORUFI03G15030
Oryza rufipogon
ORUFI03G15030
I
0.739
BGIOSGA010900
Oryza indica
BGIOSGA010900
I
0.739
OMERI03G13130
Oryza meridionalis
OMERI03G13130
I
0.739
OBART03G14380
Oryza barthii
OBART03G14380
I
0.739
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.738
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.738
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.738
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.737
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.734
PGSC0003DMG400004371
Solanum tuberosum
PGSC0003DMG400004371
I
0.734
MDP0000119725
Malus domestica
MDP0000119725
I
0.733
Cla017646
Citrullus lanatus
Cla017646
I
0.733
TCM_021317
Theobroma cacao
TCM_021317
I
0.733
MDP0000607330
Malus domestica
MDP0000607330
I
0.733
mgf012733m
Mimulus guttatus
mgf012733m
I
0.733
Si039538m.g
Setaria italica
Si039538m.g
I
0.732
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.732
LPERR03G12690
Leersia perrieri
LPERR03G12690
I
0.732
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.730
Si002107m.g
Setaria italica
Si002107m.g
I
0.730
TCM_037555
Theobroma cacao
TCM_037555
I
0.729
Bo4g004500
Brassica oleracea
Bo4g004500
I
0.728
PK06182.1
Cannabis sativa
PK06182.1
D
0.728
PDK_20s1388491g004
Phoenix dactylifera
PDK_20s1388491g004
I
0.727
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.726
Pm008294
Prunus mume
Pm008294
I
0.726
mgf024278m
Mimulus guttatus
mgf024278m
I
0.725
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.725
Solyc12g049350.1
Solanum lycopersicum
Solyc12g049350.1
I
0.725
Sb01g037670
Sorghum bicolor
Sb01g037670
I
0.724
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.724
GRMZM2G051528
Zea mays
GRMZM2G051528
I
0.722
GRMZM2G057027
Zea mays
GRMZM2G057027
I
0.722
GRMZM2G084799
Zea mays
GRMZM2G084799
I
0.722
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.721
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.721
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.721
Bra037419
Brassica rapa
Bra037419
I
0.721
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.721
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.721
TRIUR3_05136
Triticum urartu
TRIUR3_05136
I
0.717
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.714
PK16958.1
Cannabis sativa
PK16958.1
I
0.714
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.714
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.713
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.713
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.713
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.712
Bra036145
Brassica rapa
Bra036145
I
0.712
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.711
BRADI2G11676
Brachypodium distachyon
BRADI2G11676
I
0.710
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.710
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.709
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.708
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.708
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.705
GRMZM2G022686
Zea mays
GRMZM2G022686
I
0.705
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.705
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.704
MYB111
Arabidopsis thaliana
AT5G49330
D
0.704
GRMZM2G160838
Zea mays
GRMZM2G160838
I
0.703
PGSC0003DMG400009033
Solanum tuberosum
PGSC0003DMG400009033
I
0.702
Solyc01g079620.2
Solanum lycopersicum
Solyc01g079620.2
I
0.702
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.699
Lus10001458.g
Linum usitatissimum
Lus10001458.g
I
0.697
F775_21522
Aegilops tauschii
F775_21522
I
0.697
GSMUA_Achr2G20600_001
Musa acuminata
GSMUA_Achr2G20600_001
I
0.697
Ca_03498
Cicer arietinum
Ca_03498
I
0.696
gene09406-v1.0-hybrid
Fragaria vesca
gene09406-v1.0-hybrid
I
0.695
GSMUA_Achr6G12930_001
Musa acuminata
GSMUA_Achr6G12930_001
I
0.693
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.693
OGLUM03G14490
Oryza glumaepatula
OGLUM03G14490
I
0.691
F775_18434
Aegilops tauschii
F775_18434
I
0.691
ORGLA03G0138900
Oryza glaberrima
ORGLA03G0138900
I
0.691
Pm025102
Prunus mume
Pm025102
I
0.690
GSMUA_Achr10G16010_001
Musa acuminata
GSMUA_Achr10G16010_001
I
0.688
PRUPE_ppa011954mg
Prunus persica
PRUPE_ppa011954mg
I
0.687
OGLUM01G14390
Oryza glumaepatula
OGLUM01G14390
I
0.687
OS01G0305900
Oryza sativa
OS01G0305900
I
0.687
BGIOSGA003345
Oryza indica
BGIOSGA003345
I
0.687
ORUFI01G13920
Oryza rufipogon
ORUFI01G13920
I
0.687
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.686
OB01G22640
Oryza brachyantha
OB01G22640
I
0.686
MDP0000209761
Malus domestica
MDP0000209761
I
0.684
OB03G24320
Oryza brachyantha
OB03G24320
I
0.684
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.683
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.683
Lus10028435.g
Linum usitatissimum
Lus10028435.g
I
0.677
MYB11
Arabidopsis thaliana
AT3G62610
I
0.677
Lus10041888.g
Linum usitatissimum
Lus10041888.g
I
0.677
PGSC0003DMG401023433
Solanum tuberosum
PGSC0003DMG401023433
I
0.677
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.676
Gorai.009G263200
Gossypium raimondii
Gorai.009G263200
I
0.676
SELMODRAFT_450007
Selaginella moellendorffii
SELMODRAFT_450007
I
0.676
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.676
SELMODRAFT_120788
Selaginella moellendorffii
SELMODRAFT_120788
I
0.676
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.676
Pavir.Ca00231
Panicum virgatum
Pavir.Ca00231
I
0.675
Pavir.J00444
Panicum virgatum
Pavir.J00444
I
0.675
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.675
30068.m002544
Ricinus communis
30068.m002544
I
0.673
Cucsa.304110
Cucumis sativus
Cucsa.304110
I
0.671
Cla011528
Citrullus lanatus
Cla011528
I
0.671
GSMUA_Achr6G07260_001
Musa acuminata
GSMUA_Achr6G07260_001
I
0.671
GSMUA_Achr9G08600_001
Musa acuminata
GSMUA_Achr9G08600_001
I
0.671
orange1.1g046093m.g
Citrus sinensis
orange1.1g046093m.g
I
0.667
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.667
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.667
Pm005570
Prunus mume
Pm005570
I
0.667
Ciclev10023756m.g
Citrus clementina
Ciclev10023756m.g
I
0.667
MDP0000031172
Malus domestica
MDP0000031172
I
0.667
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.667
TCM_037376
Theobroma cacao
TCM_037376
I
0.664
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.664
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.664
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.664
gw1.433.32.1
Physcomitrella patens
gw1.433.32.1
I
0.664
MDP0000210851
Malus domestica
MDP0000210851
I
0.664
OB08G29560
Oryza brachyantha
OB08G29560
I
0.663
ORGLA08G0216900
Oryza glaberrima
ORGLA08G0216900
I
0.663
BGIOSGA026527
Oryza indica
BGIOSGA026527
I
0.663
MDP0000211677
Malus domestica
MDP0000211677
I
0.663
BGIOSGA026525
Oryza indica
BGIOSGA026525
I
0.663
ORUFI08G25300
Oryza rufipogon
ORUFI08G25300
I
0.663
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.662
Pm018338
Prunus mume
Pm018338
I
0.662
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.662
Lus10039214.g
Linum usitatissimum
Lus10039214.g
I
0.661
Pavir.J00442
Panicum virgatum
Pavir.J00442
I
0.661