evm.TU.supercontig_186.7 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_186.7 T287083_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.896 0.978
MYB24
M02311_2.00
Arabidopsis thaliana
RCCDAMYNN

NNRKTHGGY
PBM
Weirauch et al.(2014)
pTH8662
0.869 0.957
MYB57
M01072_2.00
Arabidopsis thaliana
RCCTAAYT

ARTTAGGY
PBM
Sullivan et al.(2014)
pTH9748
0.810 0.860
MYB57
M07059_2.00
Arabidopsis thaliana
YNTACCTAACTHHH

DDDAGTTAGGTANR
Dap-seq
OMalley et al.(2016)
MYB57_col_a
0.810 0.860
MYB57
M07060_2.00
Arabidopsis thaliana
ACCTAAY

RTTAGGT
Dap-seq
OMalley et al.(2016)
MYB57_colamp_a
0.810 0.860
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.732 0.796
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.732 0.796
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.725 0.796
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.725 0.796
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC

GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.672 0.634
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM

KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.672 0.634
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.670 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_186.7 Myb 15 62
evm.model.supercontig_186.7 Myb 68 113

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

489 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BDDG_06653 Blastomyces dermatitidis BDDG_06653 N 0.000
EURHEDRAFT_413664 Aspergillus ruber EURHEDRAFT_413664 N 0.000
PAAG_02454 Paracoccidioides sp lutzii PAAG_02454 N 0.000
PABG_04947 Paracoccidioides brasiliensis PABG_04947 N 0.000
Pc21g07200 Penicillium chrysogenum Pc21g07200 N 0.000
PCH_Pc21g07200 Penicillium rubens PCH_Pc21g07200 N 0.000
PDE_07487 Penicillium oxalicum PDE_07487 N 0.000
PITC_019880 Penicillium italicum PITC_019880 N 0.000
U727_00430750121 Penicillium solitum U727_00430750121 N 0.000