CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_19.155
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_19.155
T287088_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.691
0.729
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_19.155
Myb
5
43
ENDVVAAVEEHGARNWTVISAGIPGRSGKSCRLRWCNQL
evm.model.supercontig_19.155
Myb
49
94
HRPFTPTEDAVILRAHAIHGNKWATIARLLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
82 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.753
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.733
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.713
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
0.711
TRIUR3_08319
Triticum urartu
TRIUR3_08319
I
0.709
Ca_12468
Cicer arietinum
Ca_12468
I
0.708
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.707
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.694
F775_09670
Aegilops tauschii
F775_09670
I
0.694
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.694
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.691
Pm018862
Prunus mume
Pm018862
I
0.691
PK07741.1
Cannabis sativa
PK07741.1
D
0.691
Eucgr.J00189
Eucalyptus grandis
Eucgr.J00189
I
0.689
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.689
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.689
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.689
MDP0000284922
Malus domestica
MDP0000284922
I
0.687
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.687
TCM_042629
Theobroma cacao
TCM_042629
I
0.687
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.686
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.684
29814.m000736
Ricinus communis
29814.m000736
I
0.683
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.682
mgf018580m
Mimulus guttatus
mgf018580m
I
0.682
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.682
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.678
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.677
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.676
Si017917m.g
Setaria italica
Si017917m.g
I
0.676
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.676
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.676
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.676
gene18756-v1.0-hybrid
Fragaria vesca
gene18756-v1.0-hybrid
I
0.675
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.674
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.674
Si001686m.g
Setaria italica
Si001686m.g
I
0.674
29801.m003096
Ricinus communis
29801.m003096
I
0.672
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.672
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.672
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.672
MDP0000478512
Malus domestica
MDP0000478512
I
0.672
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.672
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.672
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.672
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.672
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.670
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.670
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.668
Si032789m.g
Setaria italica
Si032789m.g
I
0.668
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.668
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.668
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.668
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.668
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.668
OBART09G00310
Oryza barthii
OBART09G00310
I
0.668
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.668
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.668
OB09G10200
Oryza brachyantha
OB09G10200
I
0.668
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.668
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.668
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.668
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.668
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.668
OS09G0106700
Oryza sativa
OS09G0106700
I
0.668
GSMUA_Achr9G03720_001
Musa acuminata
GSMUA_Achr9G03720_001
I
0.667
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.667
MDP0000807341
Malus domestica
MDP0000807341
I
0.667
mgf020432m
Mimulus guttatus
mgf020432m
I
0.667
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.666
Cla004431
Citrullus lanatus
Cla004431
I
0.666
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.666
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.665
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.665
TCM_042474
Theobroma cacao
TCM_042474
I
0.664
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.664
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.663
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.663
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.663
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.661
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.661
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.661