CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_19.155
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_19.155
T287088_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.691
0.729
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_19.155
Myb
5
43
ENDVVAAVEEHGARNWTVISAGIPGRSGKSCRLRWCNQL
evm.model.supercontig_19.155
Myb
49
94
HRPFTPTEDAVILRAHAIHGNKWATIARLLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
82 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy