CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_21.26
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_21.26
T287099_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_21.26
Myb
205
250
RKPWSEAEDLELIAAVEKCGEGNWANILKGDFKSDRTASQLSQRWA
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29908.m006268
Ricinus communis
29908.m006268
N
0.873
POPTR_0002s10670
Populus trichocarpa
POPTR_0002s10670
N
0.863
SapurV1A.0004s1050
Salix purpurea
SapurV1A.0004s1050
N
0.863
cassava31065.valid.m1
Manihot esculenta
cassava31065.valid.m1
N
0.855
cassava4465.m1
Manihot esculenta
cassava4465.m1
N
0.855
SapurV1A.0320s0130
Salix purpurea
SapurV1A.0320s0130
N
0.838
AMTR_s00016p00255950
Amborella trichopoda
AMTR_s00016p00255950
N
0.834
PK00855.1
Cannabis sativa
PK00855.1
N
0.834
Cla022491
Citrullus lanatus
Cla022491
N
0.828
Solyc12g087970.1
Solanum lycopersicum
Solyc12g087970.1
N
0.824
Eucgr.F02154
Eucalyptus grandis
Eucgr.F02154
N
0.824
Cucsa.160570
Cucumis sativus
Cucsa.160570
N
0.818
GSMUA_Achr6G12970_001
Musa acuminata
GSMUA_Achr6G12970_001
N
0.803
orange1.1g007452m.g
Citrus sinensis
orange1.1g007452m.g
N
0.791
Ciclev10000622m.g
Citrus clementina
Ciclev10000622m.g
N
0.791
Aquca_007_00504
Aquilegia coerulea
Aquca_007_00504
N
0.789
VIT_18s0001g07620
Vitis vinifera
VIT_18s0001g07620
N
0.765
PRUPE_ppa1027142mg
Prunus persica
PRUPE_ppa1027142mg
N
0.734
Pm004407
Prunus mume
Pm004407
N
0.734
Cucsa.311940
Cucumis sativus
Cucsa.311940
N
0.732
Cucsa.311930
Cucumis sativus
Cucsa.311930
N
0.732
Cucsa.311960
Cucumis sativus
Cucsa.311960
N
0.732
Cucsa.311950
Cucumis sativus
Cucsa.311950
N
0.732
Cucsa.311970
Cucumis sativus
Cucsa.311970
N
0.732
Cla023409
Citrullus lanatus
Cla023409
N
0.719
PGSC0003DMG400009342
Solanum tuberosum
PGSC0003DMG400009342
N
0.706
Solyc04g076360.2
Solanum lycopersicum
Solyc04g076360.2
N
0.706
Aquca_007_00503
Aquilegia coerulea
Aquca_007_00503
N
0.691