evm.TU.supercontig_2.395 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_2.395 T287104_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.684 0.681
AT2G40260
M07057_2.00 		Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD		 Dap-seq
OMalley et al.(2016)
AT2G40260_col_a 		0.678 0.660
AT2G40260
M07058_2.00 		Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN		 Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a 		0.678 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_2.395 Myb 17 68

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G25920_001 Musa acuminata GSMUA_Achr4G25920_001 I 0.752
29842.m003572 Ricinus communis 29842.m003572 I 0.743
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.725
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.725
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.725
Ca_00645 Cicer arietinum Ca_00645 I 0.725
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.725
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.725
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.725
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.725
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.717
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.703
MDP0000312944 Malus domestica MDP0000312944 I 0.700
LjT01P07.20.nd Lotus japonicus LjT01P07.20.nd I 0.697
Cucsa.045140 Cucumis sativus Cucsa.045140 I 0.697
Cla014669 Citrullus lanatus Cla014669 I 0.697
Pm009670 Prunus mume Pm009670 I 0.697
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.691
MDP0000217637 Malus domestica MDP0000217637 I 0.689
POPTR_0008s07170 Populus trichocarpa POPTR_0008s07170 I 0.686
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.685
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.685
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.685
29814.m000747 Ricinus communis 29814.m000747 I 0.684
cassava21831.m1 Manihot esculenta cassava21831.m1 I 0.684
27757.m000022 Ricinus communis 27757.m000022 I 0.684
AMTR_s00021p00013790 Amborella trichopoda AMTR_s00021p00013790 I 0.684
evm.TU.supercontig_19.148 Carica papaya evm.TU.supercontig_19.148 I 0.684
SapurV1A.0061s0540 Salix purpurea SapurV1A.0061s0540 I 0.684
SapurV1A.0650s0140 Salix purpurea SapurV1A.0650s0140 I 0.684
SapurV1A.0905s0010 Salix purpurea SapurV1A.0905s0010 I 0.684
PK26523.1 Cannabis sativa PK26523.1 D 0.684
SapurV1A.0042s0270 Salix purpurea SapurV1A.0042s0270 I 0.684
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I 0.684
cassava41268.m1 Manihot esculenta cassava41268.m1 I 0.684
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I 0.684
TRIUR3_10881 Triticum urartu TRIUR3_10881 I 0.684
Gorai.009G112300 Gossypium raimondii Gorai.009G112300 I 0.684
cassava33845.m1 Manihot esculenta cassava33845.m1 I 0.684
Pm018961 Prunus mume Pm018961 I 0.684
OB11G10130 Oryza brachyantha OB11G10130 I 0.684
TCM_042189 Theobroma cacao TCM_042189 I 0.684
OB12G10410 Oryza brachyantha OB12G10410 I 0.684
POPTR_0001s28690 Populus trichocarpa POPTR_0001s28690 I 0.684
PRUPE_ppa025397mg Prunus persica PRUPE_ppa025397mg I 0.684
POPTR_0009s07890 Populus trichocarpa POPTR_0009s07890 I 0.684
POPTR_0010s19310 Populus trichocarpa POPTR_0010s19310 I 0.684
TCM_042463 Theobroma cacao TCM_042463 I 0.684
F775_29879 Aegilops tauschii F775_29879 I 0.684
Traes_4DS_99EC36CD4 Triticum aestivum Traes_4DS_99EC36CD4 I 0.684
Traes_4AL_72ECC7747 Triticum aestivum Traes_4AL_72ECC7747 I 0.684
GSMUA_Achr7G22410_001 Musa acuminata GSMUA_Achr7G22410_001 I 0.684
LPERR11G00400 Leersia perrieri LPERR11G00400 I 0.684
gene19641-v1.0-hybrid Fragaria vesca gene19641-v1.0-hybrid I 0.683
cassava27240.m1 Manihot esculenta cassava27240.m1 I 0.682
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I 0.682
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I 0.682
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.679
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.679
BRADI4G44930 Brachypodium distachyon BRADI4G44930 I 0.678
Eucgr.J00182 Eucalyptus grandis Eucgr.J00182 I 0.678
Si026524m.g Setaria italica Si026524m.g I 0.678
Pavir.J16957 Panicum virgatum Pavir.J16957 I 0.678
MDP0000617021 Malus domestica MDP0000617021 I 0.678
GRMZM5G846506 Zea mays GRMZM5G846506 I 0.678
fgenesh1_pm.C_scaffold_4001775 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001775 I 0.678
Pavir.J01622 Panicum virgatum Pavir.J01622 I 0.678
Si010342m.g Setaria italica Si010342m.g I 0.678
Bra000180 Brassica rapa Bra000180 I 0.678
Sb08g000510 Sorghum bicolor Sb08g000510 I 0.678
Thhalv10016733m.g Eutrema salsugineum Thhalv10016733m.g I 0.678
Bo3g034850 Brassica oleracea Bo3g034850 I 0.678
Bo4g188940 Brassica oleracea Bo4g188940 I 0.678
AT2G40260 Arabidopsis thaliana AT2G40260 D 0.678
Carubv10023302m.g Capsella rubella Carubv10023302m.g I 0.678
Cagra.7053s0009 Capsella grandiflora Cagra.7053s0009 I 0.678
POPTR_0016s12940 Populus trichocarpa POPTR_0016s12940 I 0.678
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.676
VIT_06s0004g07000 Vitis vinifera VIT_06s0004g07000 I 0.674
MDP0000196504 Malus domestica MDP0000196504 I 0.668
MDP0000214282 Malus domestica MDP0000214282 I 0.668
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I 0.664
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I 0.664
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I 0.664
PK23854.1 Cannabis sativa PK23854.1 I 0.664
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.664
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I 0.664
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I 0.664
mgf017043m Mimulus guttatus mgf017043m I 0.664
29780.m001368 Ricinus communis 29780.m001368 I 0.664
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.664
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I 0.664
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I 0.664
cassava20298.m1 Manihot esculenta cassava20298.m1 I 0.664
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I 0.664
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I 0.664
TCM_011166 Theobroma cacao TCM_011166 I 0.664
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.663
MLOC_72013 Hordeum vulgare MLOC_72013 I 0.662
Traes_5BL_0C6735099 Triticum aestivum Traes_5BL_0C6735099 I 0.662
F775_13531 Aegilops tauschii F775_13531 I 0.662
TRIUR3_11585 Triticum urartu TRIUR3_11585 I 0.662