evm.TU.supercontig_2794.2 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_2794.2 T287116_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN

NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.722 0.800
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.716 0.756
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.716 0.756
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.705 0.800
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH

DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.663 0.756
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_2794.2 Myb 69 118

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ARB_00240 Arthroderma benhamiae ARB_00240 I 0.000
MCYG_05706 Arthroderma otae MCYG_05706 I 0.000
BDDG_07988 Blastomyces dermatitidis BDDG_07988 N 0.000
MCYG_05706 Microsporum canis MCYG_05706 I 0.000
MGYG_02800 Microsporum gypseum MGYG_02800 I 0.000
PABG_01118 Paracoccidioides brasiliensis PABG_01118 N 0.000
PAAG_06840 Paracoccidioides sp lutzii PAAG_06840 N 0.000
H101_00939 Trichophyton interdigitale H101_00939 I 0.000
H102_02125 Trichophyton rubrum H102_02125 I 0.000
H105_02141 Trichophyton soudanense H105_02141 I 0.000
TRV_05232 Trichophyton verrucosum TRV_05232 I 0.000