evm.TU.supercontig_51.138 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_51.138 T287152_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.774 0.870
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.693 0.630
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.693 0.630
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.686 0.728
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.676 0.652
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.675 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_51.138 Myb 23 70
evm.model.supercontig_51.138 Myb 76 120

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

561 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0003s01170 Populus trichocarpa POPTR_0003s01170 N 0.000
POPTR_0003s01190 Populus trichocarpa POPTR_0003s01190 N 0.000
POPTR_0003s01200 Populus trichocarpa POPTR_0003s01200 N 0.000
POPTR_0003s01220 Populus trichocarpa POPTR_0003s01220 N 0.000
POPTR_0003s01240 Populus trichocarpa POPTR_0003s01240 N 0.000
POPTR_0074s00200 Populus trichocarpa POPTR_0074s00200 N 0.000
SapurV1A.3015s0020 Salix purpurea SapurV1A.3015s0020 N 0.000
SapurV1A.3003s0030 Salix purpurea SapurV1A.3003s0030 N 0.000
SapurV1A.0647s0100 Salix purpurea SapurV1A.0647s0100 N 0.000
SapurV1A.0310s0230 Salix purpurea SapurV1A.0310s0230 N 0.000
SapurV1A.0310s0210 Salix purpurea SapurV1A.0310s0210 N 0.000
SapurV1A.0310s0190 Salix purpurea SapurV1A.0310s0190 N 0.000
SapurV1A.3015s0030 Salix purpurea SapurV1A.3015s0030 N 0.000