CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_92.99
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_92.99
T287202_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB27
M07097_2.00
Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD
Dap-seq
OMalley et al.(2016)
MYB27_col_a
0.747
0.796
MYB27
M07098_2.00
Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN
Dap-seq
OMalley et al.(2016)
MYB27_colamp_a
0.747
0.796
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_92.99
Myb
14
61
RGPWLEEEDERLTTFVNLLGERRWDSIARASGLKRSGKSCRLRWLNYL
evm.model.supercontig_92.99
Myb
67
112
HGDISEEEEQIIIQLHQQWGNKWAKIARRLPGRTDNEIKNYWRTHL
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
138 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtMYB27
Vitis vinifera
VIT_08s0007g04830
I
0.791
Carubv10019409m.g
Capsella rubella
Carubv10019409m.g
I
0.790
Bostr.9544s0002
Boechera stricta
Bostr.9544s0002
I
0.790
Cagra.0612s0043
Capsella grandiflora
Cagra.0612s0043
I
0.790
Bo8g082570
Brassica oleracea
Bo8g082570
I
0.786
Thhalv10010915m.g
Eutrema salsugineum
Thhalv10010915m.g
I
0.779
Bra028550
Brassica rapa
Bra028550
I
0.774
Bo6g067190
Brassica oleracea
Bo6g067190
I
0.770
AtMYB27
Arabidopsis lyrata
fgenesh2_kg.5__1687__AT3G53200.1
I
0.767
PK10274.1
Cannabis sativa
PK10274.1
I
0.761
TCM_022293
Theobroma cacao
TCM_022293
I
0.760
Bra006977
Brassica rapa
Bra006977
I
0.756
orange1.1g044161m.g
Citrus sinensis
orange1.1g044161m.g
I
0.754
SapurV1A.0589s0170
Salix purpurea
SapurV1A.0589s0170
I
0.747
MYB27
Arabidopsis thaliana
AT3G53200
D
0.747
Aquca_030_00038
Aquilegia coerulea
Aquca_030_00038
I
0.746
AMTR_s01267p00006490
Amborella trichopoda
AMTR_s01267p00006490
I
0.736
Gorai.009G413600
Gossypium raimondii
Gorai.009G413600
I
0.734
Eucgr.A01648
Eucalyptus grandis
Eucgr.A01648
I
0.723
Solyc10g083900.1
Solanum lycopersicum
Solyc10g083900.1
N
0.717
PGSC0003DMG400028282
Solanum tuberosum
PGSC0003DMG400028282
N
0.717
Lus10014415.g
Linum usitatissimum
Lus10014415.g
N
0.704
Lus10023918.g
Linum usitatissimum
Lus10023918.g
N
0.704
gene09683-v1.0-hybrid
Fragaria vesca
gene09683-v1.0-hybrid
I
0.703
AtMYB27
Populus trichocarpa
POPTR_0006s12400
N
0.702
GLYMA10G06680
Glycine max
GLYMA10G06680
N
0.700
MTR_1g062940
Medicago truncatula
MTR_1g062940
N
0.698
GSMUA_Achr11G24690_001
Musa acuminata
GSMUA_Achr11G24690_001
I
0.694
GSMUA_Achr6G15370_001
Musa acuminata
GSMUA_Achr6G15370_001
I
0.693
GSMUA_Achr10G03710_001
Musa acuminata
GSMUA_Achr10G03710_001
I
0.692
GSMUA_Achr10G13520_001
Musa acuminata
GSMUA_Achr10G13520_001
I
0.692
GSMUA_Achr7G18200_001
Musa acuminata
GSMUA_Achr7G18200_001
I
0.692
OB11G27690
Oryza brachyantha
OB11G27690
I
0.689
OB01G54920
Oryza brachyantha
OB01G54920
I
0.689
GSMUA_Achr8G02640_001
Musa acuminata
GSMUA_Achr8G02640_001
I
0.687
GSMUA_Achr5G28350_001
Musa acuminata
GSMUA_Achr5G28350_001
I
0.687
ORGLA01G0394700
Oryza glaberrima
ORGLA01G0394700
I
0.686
OBART01G45730
Oryza barthii
OBART01G45730
I
0.686
BGIOSGA005283
Oryza indica
BGIOSGA005283
I
0.686
OPUNC01G44650
Oryza punctata
OPUNC01G44650
I
0.686
LPERR01G40120
Leersia perrieri
LPERR01G40120
I
0.686
ORUFI01G49220
Oryza rufipogon
ORUFI01G49220
I
0.686
Solyc09g008390.1
Solanum lycopersicum
Solyc09g008390.1
I
0.685
Cucsa.306580
Cucumis sativus
Cucsa.306580
N
0.683
cassava15759.m1
Manihot esculenta
cassava15759.m1
N
0.681
PRUPE_ppa024805mg
Prunus persica
PRUPE_ppa024805mg
N
0.681
BRADI2G62510
Brachypodium distachyon
BRADI2G62510
I
0.680
Pm026334
Prunus mume
Pm026334
N
0.678
BRADI2G37377
Brachypodium distachyon
BRADI2G37377
I
0.678
ONIVA05G01120
Oryza nivara
ONIVA05G01120
I
0.676
OMERI05G01150
Oryza meridionalis
OMERI05G01150
I
0.676
ORUFI05G01110
Oryza rufipogon
ORUFI05G01110
I
0.676
OLONG_004480
Oryza longistaminata
OLONG_004480
I
0.676
OPUNC05G00970
Oryza punctata
OPUNC05G00970
I
0.676
LPERR05G01030
Leersia perrieri
LPERR05G01030
I
0.676
OGLUM05G01090
Oryza glumaepatula
OGLUM05G01090
I
0.676
OB05G11070
Oryza brachyantha
OB05G11070
I
0.676
BGIOSGA019054
Oryza indica
BGIOSGA019054
I
0.676
OBART05G01080
Oryza barthii
OBART05G01080
I
0.676
Pavir.Ca02588
Panicum virgatum
Pavir.Ca02588
I
0.675
cassava9891.m1
Manihot esculenta
cassava9891.m1
I
0.675
BRADI4G04050
Brachypodium distachyon
BRADI4G04050
I
0.675
Si023104m.g
Setaria italica
Si023104m.g
I
0.675
Pavir.J11500
Panicum virgatum
Pavir.J11500
I
0.675
GRMZM2G047626
Zea mays
GRMZM2G047626
I
0.675
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.675
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.675
LPERR12G13390
Leersia perrieri
LPERR12G13390
I
0.675
ORGLA12G0141600
Oryza glaberrima
ORGLA12G0141600
I
0.675
OB12G23080
Oryza brachyantha
OB12G23080
I
0.675
BGIOSGA035986
Oryza indica
BGIOSGA035986
I
0.675
MYBAS2
Oryza sativa
OS12G0567300
I
0.675
ORUFI12G17930
Oryza rufipogon
ORUFI12G17930
I
0.675
ORGLA12G0206100
Oryza glaberrima
ORGLA12G0206100
I
0.675
F775_29427
Aegilops tauschii
F775_29427
I
0.674
TRAES3BF065400010CFD_g
Triticum aestivum
TRAES3BF065400010CFD_g
I
0.674
TRIUR3_22432
Triticum urartu
TRIUR3_22432
I
0.674
Traes_3AL_A8AF980F3
Triticum aestivum
Traes_3AL_A8AF980F3
I
0.674
Pavir.J08441
Panicum virgatum
Pavir.J08441
I
0.674
orange1.1g047854m.g
Citrus sinensis
orange1.1g047854m.g
I
0.673
TCM_018971
Theobroma cacao
TCM_018971
I
0.673
Ciclev10013466m.g
Citrus clementina
Ciclev10013466m.g
I
0.673
MYB112
Arabidopsis thaliana
AT1G48000
I
0.672
Bostr.15654s0036
Boechera stricta
Bostr.15654s0036
I
0.672
MYB112
Arabidopsis lyrata
fgenesh2_kg.1__3889__AT1G48000.1
I
0.672
Thhalv10012051m.g
Eutrema salsugineum
Thhalv10012051m.g
I
0.672
POPTR_0004s11720
Populus trichocarpa
POPTR_0004s11720
I
0.670
GSMUA_Achr2G19380_001
Musa acuminata
GSMUA_Achr2G19380_001
I
0.670
Si022826m.g
Setaria italica
Si022826m.g
I
0.669
Pavir.J04129
Panicum virgatum
Pavir.J04129
I
0.669
VIT_06s0004g04140
Vitis vinifera
VIT_06s0004g04140
I
0.669
Pavir.Ca00653
Panicum virgatum
Pavir.Ca00653
I
0.669
Carubv10010143m.g
Capsella rubella
Carubv10010143m.g
I
0.668
Pm015392
Prunus mume
Pm015392
I
0.668
Gorai.006G073500
Gossypium raimondii
Gorai.006G073500
I
0.667
Pavir.Ca00655
Panicum virgatum
Pavir.Ca00655
I
0.667
Gorai.005G054900
Gossypium raimondii
Gorai.005G054900
I
0.667
SapurV1A.0096s0360
Salix purpurea
SapurV1A.0096s0360
I
0.667
GRMZM2G305856
Zea mays
GRMZM2G305856
I
0.667
Pavir.J36591
Panicum virgatum
Pavir.J36591
I
0.667
Si024470m.g
Setaria italica
Si024470m.g
I
0.667
PRUPE_ppa024234mg
Prunus persica
PRUPE_ppa024234mg
I
0.667
Sb09g001590
Sorghum bicolor
Sb09g001590
I
0.667
TRIUR3_16862
Triticum urartu
TRIUR3_16862
I
0.666
MLOC_52439
Hordeum vulgare
MLOC_52439
I
0.666
F775_06315
Aegilops tauschii
F775_06315
I
0.666
Aquca_025_00059
Aquilegia coerulea
Aquca_025_00059
I
0.665
Eucgr.I02057
Eucalyptus grandis
Eucgr.I02057
I
0.665
Gorai.004G145800
Gossypium raimondii
Gorai.004G145800
I
0.665
POPTR_0017s13370
Populus trichocarpa
POPTR_0017s13370
I
0.665
MYB305
Arabidopsis thaliana
AT3G24310
I
0.664
Bo1g098860
Brassica oleracea
Bo1g098860
I
0.664
GLYMA10G26681
Glycine max
GLYMA10G26681
I
0.664
GLYMA17G17560
Glycine max
GLYMA17G17560
I
0.664
Bo3g083130
Brassica oleracea
Bo3g083130
I
0.664
Bra028369
Brassica rapa
Bra028369
I
0.664
fgenesh2_kg.3__2645__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.3__2645__AT3G24310.1
I
0.664
Thhalv10002634m.g
Eutrema salsugineum
Thhalv10002634m.g
I
0.664
Bra001941
Brassica rapa
Bra001941
I
0.664
GLYMA20G20980
Glycine max
GLYMA20G20980
I
0.664
Solyc05g053150.1
Solanum lycopersicum
Solyc05g053150.1
I
0.664
mgf004640m
Mimulus guttatus
mgf004640m
I
0.664
POPTR_0010s07450
Populus trichocarpa
POPTR_0010s07450
I
0.664
PRUPE_ppa016385mg
Prunus persica
PRUPE_ppa016385mg
I
0.664
cassava24463.valid.m1
Manihot esculenta
cassava24463.valid.m1
I
0.664
Solyc02g089190.1
Solanum lycopersicum
Solyc02g089190.1
I
0.664
Pm009050
Prunus mume
Pm009050
I
0.664
Bostr.19424s0195
Boechera stricta
Bostr.19424s0195
I
0.664
PGSC0003DMG400001376
Solanum tuberosum
PGSC0003DMG400001376
I
0.664
evm.TU.supercontig_59.23
Carica papaya
evm.TU.supercontig_59.23
I
0.664
gene28293-v1.0-hybrid
Fragaria vesca
gene28293-v1.0-hybrid
I
0.664
Carubv10014367m.g
Capsella rubella
Carubv10014367m.g
I
0.664
GSMUA_Achr8G34340_001
Musa acuminata
GSMUA_Achr8G34340_001
I
0.664
Cagra.0454s0003
Capsella grandiflora
Cagra.0454s0003
I
0.664
MTR_1g045610
Medicago truncatula
MTR_1g045610
I
0.664
VIT_05s0049g02260
Vitis vinifera
VIT_05s0049g02260
I
0.661
GLYMA13G20880
Glycine max
GLYMA13G20880
N
0.661
GRMZM2G048136
Zea mays
GRMZM2G048136
I
0.661