gene01311-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene01311-v1.0-hybrid T287220_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01311.1-v1.0-hybrid Myb 362 409
mrna01311.1-v1.0-hybrid Myb 415 460

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000258046 Malus domestica MDP0000258046 N 0.859
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.837
Pm015813 Prunus mume Pm015813 N 0.820
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.805
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.786
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.778
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.773
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.772
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.772
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.771
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.758
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.756
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.756
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.756
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.753
TCM_045715 Theobroma cacao TCM_045715 N 0.751
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.751
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.748
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.748
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.745
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.743
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.743
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.743
Cla019436 Citrullus lanatus Cla019436 N 0.741
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.741
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.740
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.739
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.739
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.734
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.730
Bo7g091360 Brassica oleracea Bo7g091360 N 0.730
Bra025337 Brassica rapa Bra025337 N 0.730
Ca_10555 Cicer arietinum Ca_10555 N 0.726
MYB35 Arabidopsis thaliana AT3G28470 N 0.726
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.726
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.717
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.713
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.713
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.713
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.713
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.708
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.708
TCM_018082 Theobroma cacao TCM_018082 N 0.706
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.705
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.702
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.700
Pm024633 Prunus mume Pm024633 N 0.694
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.694
mgf012871m Mimulus guttatus mgf012871m I 0.690
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.674
Bra002448 Brassica rapa Bra002448 I 0.666
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.663
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.663
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N 0.661