gene01457-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene01457-v1.0-hybrid T287221_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB80
M07142_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHNN
NNDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MS188_col_a 		0.825 0.914
MYB80
M07143_2.00 		Arabidopsis thaliana
YYYACCTAMYTWNNN
NNNWARKTAGGTRRR		 Dap-seq
OMalley et al.(2016)
MS188_colamp_a 		0.825 0.914
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01457.1-v1.0-hybrid Myb 14 61
mrna01457.1-v1.0-hybrid Myb 67 112

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

Invalid Input OrderBy

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action