gene01997-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene01997-v1.0-hybrid T287223_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.670 0.699
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.670 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01997.1-v1.0-hybrid Myb 14 61
mrna01997.1-v1.0-hybrid Myb 67 112

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

Invalid Input OrderBy

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action