gene02676-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene02676-v1.0-hybrid T287231_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.681 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna02676.1-v1.0-hybrid Myb 127 174

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10009128m.g Citrus clementina Ciclev10009128m.g I 0.712
orange1.1g047042m.g Citrus sinensis orange1.1g047042m.g I 0.712
OPUNC08G02520 Oryza punctata OPUNC08G02520 I 0.710
ONIVA08G02810 Oryza nivara ONIVA08G02810 I 0.710
OMERI08G02700 Oryza meridionalis OMERI08G02700 I 0.710
ORGLA08G0021900 Oryza glaberrima ORGLA08G0021900 I 0.710
Sb07g003170 Sorghum bicolor Sb07g003170 I 0.710
Pavir.J25346 Panicum virgatum Pavir.J25346 I 0.710
Si013948m.g Setaria italica Si013948m.g I 0.710
OGLUM08G02800 Oryza glumaepatula OGLUM08G02800 I 0.710
OS08G0144000 Oryza sativa OS08G0144000 I 0.710
ORUFI08G03000 Oryza rufipogon ORUFI08G03000 I 0.710
GRMZM2G112764 Zea mays GRMZM2G112764 I 0.710
BGIOSGA027973 Oryza indica BGIOSGA027973 I 0.710
OBART08G02720 Oryza barthii OBART08G02720 I 0.710
LPERR08G02800 Leersia perrieri LPERR08G02800 I 0.710
BGIOSGA002215 Oryza indica BGIOSGA002215 I 0.699
OGLUM01G06460 Oryza glumaepatula OGLUM01G06460 I 0.699
OLONG_008716 Oryza longistaminata OLONG_008716 I 0.699
LPERR01G05630 Leersia perrieri LPERR01G05630 I 0.699
ONIVA01G06840 Oryza nivara ONIVA01G06840 I 0.699
OMERI01G06100 Oryza meridionalis OMERI01G06100 I 0.699
OS01G0192300 Oryza sativa OS01G0192300 I 0.699
OBART01G05900 Oryza barthii OBART01G05900 I 0.699
OPUNC01G05740 Oryza punctata OPUNC01G05740 I 0.699
ORGLA01G0055800 Oryza glaberrima ORGLA01G0055800 I 0.699
OB01G15870 Oryza brachyantha OB01G15870 I 0.699
ORUFI01G06450 Oryza rufipogon ORUFI01G06450 I 0.699
MTR_6g092540 Medicago truncatula MTR_6g092540 I 0.691
Ca_15538 Cicer arietinum Ca_15538 I 0.691
Ca_17598 Cicer arietinum Ca_17598 I 0.684
gw1.6.1691.1 Ostreococcus RCC809 gw1.6.1691.1 I 0.681
0600010132 Ostreococcus tauri 0600010132 D 0.681
AMTR_s00111p00135880 Amborella trichopoda AMTR_s00111p00135880 I 0.681
OSTLU_9418 Ostreococcus lucimarinus OSTLU_9418 I 0.681
SapurV1A.1673s0010 Salix purpurea SapurV1A.1673s0010 I 0.674
SapurV1A.0138s0010 Salix purpurea SapurV1A.0138s0010 I 0.674
MDP0000758053 Malus domestica MDP0000758053 I 0.663
Solyc08g065380.2 Solanum lycopersicum Solyc08g065380.2 I 0.663
Pm006358 Prunus mume Pm006358 I 0.663
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.663
gene00738-v1.0-hybrid Fragaria vesca gene00738-v1.0-hybrid I 0.663
PRUPE_ppa008539mg Prunus persica PRUPE_ppa008539mg I 0.663
mgf023843m Mimulus guttatus mgf023843m I 0.662
PRUPE_ppa016461mg Prunus persica PRUPE_ppa016461mg I 0.662