CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene07418-v1.0-hybrid
(
Fragaria vesca
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
gene07418-v1.0-hybrid
T287257_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna07418.1-v1.0-hybrid
Myb
32
79
KGAWTAEEDQKLAEVIAIHGAKKWKSIAAKAGLNRCGKSCRLRWLNYL
mrna07418.1-v1.0-hybrid
Myb
85
130
RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Fragaria vesca
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0003s06320
Populus trichocarpa
POPTR_0003s06320
N
0.873
Cla012784
Citrullus lanatus
Cla012784
N
0.861
Cucsa.340790
Cucumis sativus
Cucsa.340790
N
0.861
MTR_4g100720
Medicago truncatula
MTR_4g100720
N
0.839
GLYMA11G03770
Glycine max
GLYMA11G03770
N
0.827
cassava2804.m1
Manihot esculenta
cassava2804.m1
N
0.826
MDP0000124555
Malus domestica
MDP0000124555
N
0.826
SapurV1A.0002s0910
Salix purpurea
SapurV1A.0002s0910
N
0.825
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
0.823
TCM_015933
Theobroma cacao
TCM_015933
I
0.821
cassava31571.valid.m1
Manihot esculenta
cassava31571.valid.m1
N
0.818
PRUPE_ppa016135mg
Prunus persica
PRUPE_ppa016135mg
N
0.818
gene08880-v1.0-hybrid
Fragaria vesca
gene08880-v1.0-hybrid
N
0.818
Pm013277
Prunus mume
Pm013277
N
0.818
Ca_12762
Cicer arietinum
Ca_12762
N
0.818
Pm023419
Prunus mume
Pm023419
N
0.818
evm.TU.supercontig_25.115
Carica papaya
evm.TU.supercontig_25.115
N
0.816
PRUPE_ppa024533mg
Prunus persica
PRUPE_ppa024533mg
N
0.815
SapurV1A.0177s0340
Salix purpurea
SapurV1A.0177s0340
N
0.813
SapurV1A.0177s0330
Salix purpurea
SapurV1A.0177s0330
N
0.813
SapurV1A.4052s0010
Salix purpurea
SapurV1A.4052s0010
N
0.813
TCM_029126
Theobroma cacao
TCM_029126
N
0.807
MDP0000226215
Malus domestica
MDP0000226215
N
0.804
MDP0000253904
Malus domestica
MDP0000253904
N
0.804
Eucgr.F04422
Eucalyptus grandis
Eucgr.F04422
N
0.795
GLYMA17G15270
Glycine max
GLYMA17G15270
I
0.794
Gorai.009G146500
Gossypium raimondii
Gorai.009G146500
N
0.793
POPTR_0001s16970
Populus trichocarpa
POPTR_0001s16970
N
0.792
TCM_037383
Theobroma cacao
TCM_037383
I
0.791
orange1.1g028922m.g
Citrus sinensis
orange1.1g028922m.g
N
0.791
Ciclev10009521m.g
Citrus clementina
Ciclev10009521m.g
N
0.791
Eucgr.F04423
Eucalyptus grandis
Eucgr.F04423
N
0.790
VIT_04s0008g01870
Vitis vinifera
VIT_04s0008g01870
I
0.790
VIT_09s0002g01380
Vitis vinifera
VIT_09s0002g01380
N
0.787
MDP0000931057
Malus domestica
MDP0000931057
N
0.786
Ciclev10026498m.g
Citrus clementina
Ciclev10026498m.g
I
0.786
orange1.1g036591m.g
Citrus sinensis
orange1.1g036591m.g
I
0.786
MDP0000143276
Malus domestica
MDP0000143276
I
0.785
MDP0000133817
Malus domestica
MDP0000133817
I
0.785
Gorai.009G040800
Gossypium raimondii
Gorai.009G040800
N
0.784
POPTR_0006s23780
Populus trichocarpa
POPTR_0006s23780
I
0.781
SapurV1A.0710s0030
Salix purpurea
SapurV1A.0710s0030
I
0.781
GLYMA01G41610
Glycine max
GLYMA01G41610
N
0.780
Gorai.004G196800
Gossypium raimondii
Gorai.004G196800
N
0.779
Aquca_011_00570
Aquilegia coerulea
Aquca_011_00570
N
0.777
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.776
PRUPE_ppa026916mg
Prunus persica
PRUPE_ppa026916mg
I
0.775
VIT_00s0341g00050
Vitis vinifera
VIT_00s0341g00050
N
0.775
Pm005577
Prunus mume
Pm005577
I
0.775
POPTR_0018s08500
Populus trichocarpa
POPTR_0018s08500
N
0.775
cassava9944.m1
Manihot esculenta
cassava9944.m1
I
0.774
Gorai.009G040900
Gossypium raimondii
Gorai.009G040900
N
0.770
Eucgr.E00407
Eucalyptus grandis
Eucgr.E00407
N
0.768
cassava33302.m1
Manihot esculenta
cassava33302.m1
I
0.767
Eucgr.C00725
Eucalyptus grandis
Eucgr.C00725
I
0.765
evm.TU.supercontig_46.144
Carica papaya
evm.TU.supercontig_46.144
N
0.763
MDP0000261265
Malus domestica
MDP0000261265
I
0.762
gene15383-v1.0-hybrid
Fragaria vesca
gene15383-v1.0-hybrid
N
0.761
Gorai.012G011700
Gossypium raimondii
Gorai.012G011700
N
0.760
Eucgr.B01869
Eucalyptus grandis
Eucgr.B01869
I
0.759
PDK_20s13009436g002
Phoenix dactylifera
PDK_20s13009436g002
I
0.758
Ciclev10022303m.g
Citrus clementina
Ciclev10022303m.g
N
0.755
orange1.1g028843m.g
Citrus sinensis
orange1.1g028843m.g
N
0.755
Eucgr.B01964
Eucalyptus grandis
Eucgr.B01964
I
0.751
SapurV1A.1360s0110
Salix purpurea
SapurV1A.1360s0110
N
0.750
SapurV1A.1087s0090
Salix purpurea
SapurV1A.1087s0090
N
0.750
POPTR_0003s07680
Populus trichocarpa
POPTR_0003s07680
N
0.750
GLYMA05G04900
Glycine max
GLYMA05G04900
I
0.749
SapurV1A.0435s0070
Salix purpurea
SapurV1A.0435s0070
N
0.748
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.741
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.736
Gorai.010G096800
Gossypium raimondii
Gorai.010G096800
N
0.727
GSMUA_Achr11G23500_001
Musa acuminata
GSMUA_Achr11G23500_001
N
0.726
mgf024953m
Mimulus guttatus
mgf024953m
N
0.722
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.721
28226.m000839
Ricinus communis
28226.m000839
I
0.721
TCM_000535
Theobroma cacao
TCM_000535
I
0.718
TCM_037379
Theobroma cacao
TCM_037379
I
0.717
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.715
Lus10033438.g
Linum usitatissimum
Lus10033438.g
I
0.715
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.714
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.713
GSMUA_Achr4G21700_001
Musa acuminata
GSMUA_Achr4G21700_001
I
0.713
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.713
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.712
TCM_037559
Theobroma cacao
TCM_037559
I
0.712
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.712
GSMUA_Achr2G17960_001
Musa acuminata
GSMUA_Achr2G17960_001
N
0.711
PK08631.1
Cannabis sativa
PK08631.1
N
0.711
cassava2758.m1
Manihot esculenta
cassava2758.m1
I
0.711
mgf018735m
Mimulus guttatus
mgf018735m
N
0.711
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.708
Lus10000470.g
Linum usitatissimum
Lus10000470.g
I
0.706
GRMZM2G701063
Zea mays
GRMZM2G701063
I
0.705
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.704
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.704
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.703
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.702
Pm027047
Prunus mume
Pm027047
I
0.702
Pavir.Db02046
Panicum virgatum
Pavir.Db02046
I
0.701
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.700
gene15386-v1.0-hybrid
Fragaria vesca
gene15386-v1.0-hybrid
I
0.699
GSMUA_Achr9G27380_001
Musa acuminata
GSMUA_Achr9G27380_001
I
0.699
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.699
GSMUA_Achr10G17610_001
Musa acuminata
GSMUA_Achr10G17610_001
I
0.699
OB03G30160
Oryza brachyantha
OB03G30160
I
0.698
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.698
OB06G16110
Oryza brachyantha
OB06G16110
I
0.698
ORGLA06G0059500
Oryza glaberrima
ORGLA06G0059500
I
0.698
ORUFI06G06900
Oryza rufipogon
ORUFI06G06900
I
0.698
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.697
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.696
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.695
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
0.695
Thhalv10003461m.g
Eutrema salsugineum
Thhalv10003461m.g
I
0.695
Pm005572
Prunus mume
Pm005572
I
0.695
GSMUA_Achr8G14540_001
Musa acuminata
GSMUA_Achr8G14540_001
N
0.693
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.693
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.692
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.692
evm.TU.supercontig_126.30
Carica papaya
evm.TU.supercontig_126.30
N
0.691
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.691
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.691
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.691
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.691
TCM_004509
Theobroma cacao
TCM_004509
I
0.691
GSMUA_Achr7G18560_001
Musa acuminata
GSMUA_Achr7G18560_001
I
0.690
TCM_010778
Theobroma cacao
TCM_010778
I
0.689
MDP0000184538
Malus domestica
MDP0000184538
I
0.686
Eucgr.J02817
Eucalyptus grandis
Eucgr.J02817
I
0.686
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
0.686
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.685
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.685
Gorai.007G179300
Gossypium raimondii
Gorai.007G179300
I
0.685
Sb10g006700
Sorghum bicolor
Sb10g006700
I
0.685
SapurV1A.0120s0010
Salix purpurea
SapurV1A.0120s0010
I
0.684
POPTR_0006s29080
Populus trichocarpa
POPTR_0006s29080
I
0.683
TCM_037376
Theobroma cacao
TCM_037376
I
0.682
Si038905m.g
Setaria italica
Si038905m.g
I
0.682
MDP0000031172
Malus domestica
MDP0000031172
I
0.682
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.682
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.682
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.682
SapurV1A.0390s0200
Salix purpurea
SapurV1A.0390s0200
I
0.682
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.682
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.682
SapurV1A.1730s0020
Salix purpurea
SapurV1A.1730s0020
I
0.682
MDP0000210851
Malus domestica
MDP0000210851
I
0.682
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.682
Ca_03154
Cicer arietinum
Ca_03154
I
0.682
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.682
Pm005570
Prunus mume
Pm005570
I
0.682
Eucgr.F03176
Eucalyptus grandis
Eucgr.F03176
I
0.681
cassava3467.m1
Manihot esculenta
cassava3467.m1
N
0.681
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.681
LjT02E24.110.nc
Lotus japonicus
LjT02E24.110.nc
I
0.680
gene08694-v1.0-hybrid
Fragaria vesca
gene08694-v1.0-hybrid
I
0.679
VIT_17s0000g02650
Vitis vinifera
VIT_17s0000g02650
I
0.677
Eucgr.J02819
Eucalyptus grandis
Eucgr.J02819
N
0.676
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.675
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.675
Pm005571
Prunus mume
Pm005571
I
0.674
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.674
VIT_04s0008g01840
Vitis vinifera
VIT_04s0008g01840
I
0.673
SapurV1A.0102s0340
Salix purpurea
SapurV1A.0102s0340
I
0.672
MDP0000437717
Malus domestica
MDP0000437717
I
0.672
PK16315.1
Cannabis sativa
PK16315.1
I
0.672
gene07416-v1.0-hybrid
Fragaria vesca
gene07416-v1.0-hybrid
I
0.672
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.671
gene15389-v1.0-hybrid
Fragaria vesca
gene15389-v1.0-hybrid
I
0.669
MDP0000318013
Malus domestica
MDP0000318013
I
0.669
PRUPE_ppa019380mg
Prunus persica
PRUPE_ppa019380mg
I
0.668
Eucgr.C03153
Eucalyptus grandis
Eucgr.C03153
N
0.667
Eucgr.C03152
Eucalyptus grandis
Eucgr.C03152
N
0.667
Eucgr.B00866
Eucalyptus grandis
Eucgr.B00866
I
0.666
TRIUR3_09734
Triticum urartu
TRIUR3_09734
I
0.666
POPTR_0018s03770
Populus trichocarpa
POPTR_0018s03770
I
0.666
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.666
Bo8g030520
Brassica oleracea
Bo8g030520
I
0.665
TT2
Arabidopsis thaliana
AT5G35550
I
0.665
Eucgr.B02896
Eucalyptus grandis
Eucgr.B02896
I
0.665
PK05970.1
Cannabis sativa
PK05970.1
I
0.665
GLYMA10G35061
Glycine max
GLYMA10G35061
I
0.665
Bra035532
Brassica rapa
Bra035532
I
0.665
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.665
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
0.665
LjT02E24.60.nc
Lotus japonicus
LjT02E24.60.nc
I
0.665
PK11717.1
Cannabis sativa
PK11717.1
I
0.665
Solyc05g008250.1
Solanum lycopersicum
Solyc05g008250.1
I
0.665
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.665
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
0.665
cassava6228.valid.m1
Manihot esculenta
cassava6228.valid.m1
I
0.665
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.665
Eucgr.C03555
Eucalyptus grandis
Eucgr.C03555
I
0.665
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
0.665
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.665
VIT_17s0000g02660
Vitis vinifera
VIT_17s0000g02660
I
0.665
POPTR_0010s12420
Populus trichocarpa
POPTR_0010s12420
I
0.665
POPTR_0017s02990
Populus trichocarpa
POPTR_0017s02990
I
0.665
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.665
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
0.665
VIT_01s0011g04760
Vitis vinifera
VIT_01s0011g04760
I
0.665
PGSC0003DMG400030548
Solanum tuberosum
PGSC0003DMG400030548
I
0.662
SapurV1A.0930s0010
Salix purpurea
SapurV1A.0930s0010
I
0.662