gene07418-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene07418-v1.0-hybrid T287257_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna07418.1-v1.0-hybrid Myb 32 79
mrna07418.1-v1.0-hybrid Myb 85 130

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.685
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.671
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.665
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.686
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.767
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.691
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.692
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.665
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.774
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.684
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.672
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.701
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.712
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.665
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.665
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.665
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.786
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.682
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.711
28226.m000839 Ricinus communis 28226.m000839 I 0.721
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.673
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.790
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.665
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.681
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.703
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.677
VIT_17s0000g02660 Vitis vinifera VIT_17s0000g02660 I 0.665
Ca_03154 Cicer arietinum Ca_03154 I 0.682
SapurV1A.0930s0010 Salix purpurea SapurV1A.0930s0010 I 0.662
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.682
Pm005570 Prunus mume Pm005570 I 0.682
Pm005571 Prunus mume Pm005571 I 0.674
Pm005572 Prunus mume Pm005572 I 0.695
Pm005577 Prunus mume Pm005577 I 0.775
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.781
Pm027047 Prunus mume Pm027047 I 0.702
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.786
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.666
MDP0000143276 Malus domestica MDP0000143276 I 0.785
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.672
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.679
MDP0000133817 Malus domestica MDP0000133817 I 0.785
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.699
gene15389-v1.0-hybrid Fragaria vesca gene15389-v1.0-hybrid I 0.669
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.695
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.682
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.741
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.696
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.693
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.666
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.674
Gorai.007G179300 Gossypium raimondii Gorai.007G179300 I 0.685
MDP0000031172 Malus domestica MDP0000031172 I 0.682
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.715
MDP0000184538 Malus domestica MDP0000184538 I 0.686
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.736
MDP0000210851 Malus domestica MDP0000210851 I 0.682
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.759
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.751
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.665
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.665
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.704
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.692
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.704
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.765
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.675
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.665
MDP0000437717 Malus domestica MDP0000437717 I 0.672
MDP0000318013 Malus domestica MDP0000318013 I 0.669
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.681
MDP0000261265 Malus domestica MDP0000261265 I 0.762
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.665
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.686
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.706
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.700
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.713
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.699
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.690
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.715
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.682
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.721
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.699
PK16315.1 Cannabis sativa PK16315.1 I 0.672
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.691
OB03G30160 Oryza brachyantha OB03G30160 I 0.698
OB06G16110 Oryza brachyantha OB06G16110 I 0.698
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.698
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.698
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.698
PGSC0003DMG400030548 Solanum tuberosum PGSC0003DMG400030548 I 0.662
PK11717.1 Cannabis sativa PK11717.1 I 0.665
PK05970.1 Cannabis sativa PK05970.1 I 0.665
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.691
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.680
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.714
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.697
TT2 Arabidopsis thaliana AT5G35550 I 0.665
Bo8g030520 Brassica oleracea Bo8g030520 I 0.665
Bra035532 Brassica rapa Bra035532 I 0.665
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.665
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.708
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.749
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.713
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.665
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.758
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.713
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.794
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.665
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.705
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.699
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.665
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.781
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.691
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.775
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.682
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.685
Si038905m.g Setaria italica Si038905m.g I 0.682
Solyc05g008250.1 Solanum lycopersicum Solyc05g008250.1 I 0.665
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.675
TCM_000535 Theobroma cacao TCM_000535 I 0.718
TCM_004509 Theobroma cacao TCM_004509 I 0.691
TCM_010778 Theobroma cacao TCM_010778 I 0.689
TCM_015933 Theobroma cacao TCM_015933 I 0.821
TCM_037376 Theobroma cacao TCM_037376 I 0.682
TCM_037379 Theobroma cacao TCM_037379 I 0.717
TCM_037383 Theobroma cacao TCM_037383 I 0.791
TCM_037559 Theobroma cacao TCM_037559 I 0.712
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.666
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.665
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.682
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.682
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.702
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.685
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.695
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.665
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.668
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.665
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.682
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.695
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.683
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.712
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.682
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.666
PK08631.1 Cannabis sativa PK08631.1 N 0.711
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.750
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.779
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.791
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.825
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.750
MDP0000253904 Malus domestica MDP0000253904 N 0.804
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.813
MDP0000226215 Malus domestica MDP0000226215 N 0.804
MDP0000931057 Malus domestica MDP0000931057 N 0.786
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.755
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.748
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.813
MDP0000124555 Malus domestica MDP0000124555 N 0.826
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.813
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.760
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.776
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.815
TCM_029126 Theobroma cacao TCM_029126 N 0.807
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.775
Ca_12762 Cicer arietinum Ca_12762 N 0.818
Cla012784 Citrullus lanatus Cla012784 N 0.861
Pm013277 Prunus mume Pm013277 N 0.818
Pm023419 Prunus mume Pm023419 N 0.818
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.826
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.818
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.818
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.775
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.780
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.827
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.726
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.711
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.693
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.839
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.792
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.873
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.750
cassava3467.m1 Manihot esculenta cassava3467.m1 N 0.681
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.787
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.861
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.676
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.691
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.816
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.763
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.818
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.761
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.784
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.770
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.793
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.790
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.795
mgf018735m Mimulus guttatus mgf018735m N 0.711
mgf024953m Mimulus guttatus mgf024953m N 0.722
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.777
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.791
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.755
Eucgr.C03152 Eucalyptus grandis Eucgr.C03152 N 0.667
Eucgr.C03153 Eucalyptus grandis Eucgr.C03153 N 0.667
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.823
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.768
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.727