gene08880-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene08880-v1.0-hybrid T287269_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna08880.1-v1.0-hybrid Myb 15 71
mrna08880.1-v1.0-hybrid Myb 77 122

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm023419 Prunus mume Pm023419 N 0.909
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.909
MDP0000226215 Malus domestica MDP0000226215 N 0.895
MDP0000253904 Malus domestica MDP0000253904 N 0.895
TCM_015933 Theobroma cacao TCM_015933 I 0.890
MDP0000143276 Malus domestica MDP0000143276 I 0.876
MDP0000133817 Malus domestica MDP0000133817 I 0.876
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.866
Cla012784 Citrullus lanatus Cla012784 N 0.866
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.858
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.857
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.852
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.852
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.852
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.848
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.847
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.844
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.843
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.842
Pm013277 Prunus mume Pm013277 N 0.840
MDP0000124555 Malus domestica MDP0000124555 N 0.839
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.837
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.837
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.835
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.834
TCM_029126 Theobroma cacao TCM_029126 N 0.833
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.833
Ciclev10022303m.g Citrus clementina Ciclev10022303m.g N 0.833
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.829
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.827
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.822
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.822
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.822
MDP0000931057 Malus domestica MDP0000931057 N 0.819
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.818
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.818
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.809
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.808
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.799
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.797
TCM_037383 Theobroma cacao TCM_037383 I 0.796
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.789
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.789
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.788
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.788
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.786
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.786
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.786
Pm005577 Prunus mume Pm005577 I 0.783
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.783
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.782
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.780
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.775
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.774
MDP0000261265 Malus domestica MDP0000261265 I 0.770
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.769
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.763
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.762
mgf018735m Mimulus guttatus mgf018735m N 0.759
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.756
Ca_12762 Cicer arietinum Ca_12762 N 0.752
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.734
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.732
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.732
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.726
mgf024953m Mimulus guttatus mgf024953m N 0.726
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.725
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.721
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.721
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.715
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.715
F775_19148 Aegilops tauschii F775_19148 I 0.715
Pm005573 Prunus mume Pm005573 I 0.714
Pm027048 Prunus mume Pm027048 I 0.714
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.714
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.714
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.713
F775_17212 Aegilops tauschii F775_17212 I 0.713
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.713
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.712
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.712
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.710
MDP0000140609 Malus domestica MDP0000140609 I 0.709
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.709
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.709
AMTR_s00024p00225650 Amborella trichopoda AMTR_s00024p00225650 N 0.706
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.704
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.703
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.703
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.703
MDP0000887107 Malus domestica MDP0000887107 I 0.703
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.701
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.699
Gorai.007G179300 Gossypium raimondii Gorai.007G179300 I 0.697
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.697
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.696
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.695
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.695
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.695
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.695
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.692
GSMUA_Achr3G27700_001 Musa acuminata GSMUA_Achr3G27700_001 I 0.690
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.689
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.688
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.688
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.686
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.686
TCM_037559 Theobroma cacao TCM_037559 I 0.686
28226.m000839 Ricinus communis 28226.m000839 I 0.686
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.686
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.686
TCM_029121 Theobroma cacao TCM_029121 I 0.684
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.684
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.683
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.682
TCM_000535 Theobroma cacao TCM_000535 I 0.682
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.680
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.678
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.677
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.677
VIT_17s0000g02660 Vitis vinifera VIT_17s0000g02660 I 0.677
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.677
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.677
MDP0000250597 Malus domestica MDP0000250597 I 0.677
VIT_01s0011g04760 Vitis vinifera VIT_01s0011g04760 I 0.677
TCM_010839 Theobroma cacao TCM_010839 I 0.677
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.677
Gorai.002G180300 Gossypium raimondii Gorai.002G180300 I 0.677
PK05970.1 Cannabis sativa PK05970.1 I 0.677
PK11717.1 Cannabis sativa PK11717.1 I 0.677
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.677
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.677
POPTR_0010s12420 Populus trichocarpa POPTR_0010s12420 I 0.677
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.677
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.677
Solyc05g008250.1 Solanum lycopersicum Solyc05g008250.1 I 0.677
F775_42516 Aegilops tauschii F775_42516 I 0.676
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.675
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.675
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.675
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.675
Pm027047 Prunus mume Pm027047 I 0.675
PGSC0003DMG400030548 Solanum tuberosum PGSC0003DMG400030548 I 0.674
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.673
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.673
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.673
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.673
TCM_037379 Theobroma cacao TCM_037379 I 0.673
PDK_20s1554341g001 Phoenix dactylifera PDK_20s1554341g001 I 0.673
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.672
cassava2597.m1 Manihot esculenta cassava2597.m1 I 0.672
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.671
OB06G16110 Oryza brachyantha OB06G16110 I 0.671
ATMYB2 Vitis vinifera VIT_07s0005g01950 I 0.671
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.671
OB03G30160 Oryza brachyantha OB03G30160 I 0.671
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.671
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.671
POPTR_0004s08650 Populus trichocarpa POPTR_0004s08650 I 0.671
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.670
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.670
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.670
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.669
Gorai.006G080800 Gossypium raimondii Gorai.006G080800 I 0.668
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.668
Gorai.005G068900 Gossypium raimondii Gorai.005G068900 I 0.668
Pm014372 Prunus mume Pm014372 I 0.667
TCM_019261 Theobroma cacao TCM_019261 I 0.667
SapurV1A.0163s0150 Salix purpurea SapurV1A.0163s0150 I 0.667
GLYMA07G33960 Glycine max GLYMA07G33960 I 0.667
Pm029185 Prunus mume Pm029185 I 0.667
GLYMA20G01610 Glycine max GLYMA20G01610 I 0.667
POPTR_0008s12750 Populus trichocarpa POPTR_0008s12750 I 0.667
PRUPE_ppa010716mg Prunus persica PRUPE_ppa010716mg I 0.667
PRUPE_ppa010846mg Prunus persica PRUPE_ppa010846mg I 0.667
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.666
evm.TU.supercontig_51.138 Carica papaya evm.TU.supercontig_51.138 I 0.666
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.666
GSMUA_Achr2G04730_001 Musa acuminata GSMUA_Achr2G04730_001 I 0.666
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.666
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.666
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.665
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.665
Pm025102 Prunus mume Pm025102 I 0.665
Cucsa.304110 Cucumis sativus Cucsa.304110 I 0.665
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.665
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I 0.665
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.665
TCM_004509 Theobroma cacao TCM_004509 I 0.665
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.665
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.665
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.665
Cla011528 Citrullus lanatus Cla011528 I 0.665
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.665
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.665
GSMUA_Achr7G18550_001 Musa acuminata GSMUA_Achr7G18550_001 I 0.664
gene15386-v1.0-hybrid Fragaria vesca gene15386-v1.0-hybrid I 0.664
cassava39393.m1 Manihot esculenta cassava39393.m1 I 0.663
gene09407-v1.0-hybrid Fragaria vesca gene09407-v1.0-hybrid I 0.662
Ca_07460 Cicer arietinum Ca_07460 I 0.662
GSMUA_Achr10G19970_001 Musa acuminata GSMUA_Achr10G19970_001 I 0.662
TCM_010778 Theobroma cacao TCM_010778 I 0.662