gene10329-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene10329-v1.0-hybrid T287286_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna10329.1-v1.0-hybrid Myb 4 53
mrna10329.1-v1.0-hybrid Myb 59 104

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000252887 Malus domestica MDP0000252887 N 0.867
Cucsa.031620 Cucumis sativus Cucsa.031620 N 0.850
TCM_019507 Theobroma cacao TCM_019507 N 0.849
Cla007228 Citrullus lanatus Cla007228 N 0.827
Ciclev10011915m.g Citrus clementina Ciclev10011915m.g N 0.825
mgf026496m Mimulus guttatus mgf026496m N 0.824
30167.m000852 Ricinus communis 30167.m000852 N 0.820
GSMUA_Achr9G19380_001 Musa acuminata GSMUA_Achr9G19380_001 N 0.806
AMTR_s00044p00233260 Amborella trichopoda AMTR_s00044p00233260 N 0.798
gene18421-v1.0-hybrid Fragaria vesca gene18421-v1.0-hybrid N 0.795
gene08535-v1.0-hybrid Fragaria vesca gene08535-v1.0-hybrid N 0.795
PK14097.1 Cannabis sativa PK14097.1 N 0.794
POPTR_0006s08610 Populus trichocarpa POPTR_0006s08610 N 0.787
SapurV1A.0001s1780 Salix purpurea SapurV1A.0001s1780 N 0.787
cassava35798.valid.m1 Manihot esculenta cassava35798.valid.m1 N 0.778
29767.m000199 Ricinus communis 29767.m000199 N 0.778
Pm002699 Prunus mume Pm002699 N 0.778
PRUPE_ppa007753mg Prunus persica PRUPE_ppa007753mg N 0.778
evm.TU.supercontig_333.1 Carica papaya evm.TU.supercontig_333.1 N 0.778
28603.m000172 Ricinus communis 28603.m000172 N 0.778
Eucgr.K03130 Eucalyptus grandis Eucgr.K03130 N 0.778
GLYMA03G19030 Glycine max GLYMA03G19030 N 0.778
GSMUA_Achr5G29070_001 Musa acuminata GSMUA_Achr5G29070_001 N 0.776
GLYMA18G26600 Glycine max GLYMA18G26600 N 0.775
Bostr.23794s0314 Boechera stricta Bostr.23794s0314 N 0.774
Cagra.18121s0004 Capsella grandiflora Cagra.18121s0004 N 0.774
AS1 Arabidopsis thaliana AT2G37630 N 0.774
fgenesh1_pm.C_scaffold_4001520 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001520 N 0.774
Bra000011 Brassica rapa Bra000011 N 0.774
Bo3g031880 Brassica oleracea Bo3g031880 N 0.774
Bo4g030340 Brassica oleracea Bo4g030340 N 0.774
Bra005177 Brassica rapa Bra005177 N 0.774
Lus10024392.g Linum usitatissimum Lus10024392.g N 0.774
Thhalv10016830m.g Eutrema salsugineum Thhalv10016830m.g N 0.774
scaffold_402408.1 Arabidopsis lyrata scaffold_402408.1 N 0.774
POPTR_0004s10250 Populus trichocarpa POPTR_0004s10250 N 0.773
MDP0000708334 Malus domestica MDP0000708334 N 0.772
Aquca_027_00369 Aquilegia coerulea Aquca_027_00369 N 0.772
VIT_14s0083g00120 Vitis vinifera VIT_14s0083g00120 N 0.772
VIT_08s0007g00410 Vitis vinifera VIT_08s0007g00410 N 0.772
PGSC0003DMG400008834 Solanum tuberosum PGSC0003DMG400008834 N 0.770
Ciclev10012089m.g Citrus clementina Ciclev10012089m.g N 0.770
Solyc09g010840.1 Solanum lycopersicum Solyc09g010840.1 N 0.770
orange1.1g018768m.g Citrus sinensis orange1.1g018768m.g N 0.770
chr3.LjT11G09.150.nc Lotus japonicus chr3.LjT11G09.150.nc N 0.769
MDP0000282792 Malus domestica MDP0000282792 N 0.769
Carubv10023471m.g Capsella rubella Carubv10023471m.g N 0.769
Pavir.Cb00486 Panicum virgatum Pavir.Cb00486 N 0.765
GRMZM2G403620 Zea mays GRMZM2G403620 N 0.765
BRADI4G03970 Brachypodium distachyon BRADI4G03970 N 0.765
Sb08g018840 Sorghum bicolor Sb08g018840 N 0.765
TCM_021932 Theobroma cacao TCM_021932 N 0.763
OBART12G16450 Oryza barthii OBART12G16450 N 0.762
ONIVA02G22170 Oryza nivara ONIVA02G22170 N 0.762
ORUFI12G18280 Oryza rufipogon ORUFI12G18280 N 0.762
OS12G0572000 Oryza sativa OS12G0572000 N 0.762
ORGLA12G0144700 Oryza glaberrima ORGLA12G0144700 N 0.762
OPUNC12G14950 Oryza punctata OPUNC12G14950 N 0.762
OMERI08G15890 Oryza meridionalis OMERI08G15890 N 0.762
BGIOSGA037216 Oryza indica BGIOSGA037216 N 0.762
OGLUM12G18010 Oryza glumaepatula OGLUM12G18010 N 0.762
Traes_5BS_E635B0A281 Triticum aestivum Traes_5BS_E635B0A281 N 0.760
Traes_5DS_8F3BD4450 Triticum aestivum Traes_5DS_8F3BD4450 N 0.760
TRIUR3_13997 Triticum urartu TRIUR3_13997 N 0.760
OB12G23330 Oryza brachyantha OB12G23330 N 0.760
Gorai.012G104100 Gossypium raimondii Gorai.012G104100 N 0.759
GSMUA_Achr9G03320_001 Musa acuminata GSMUA_Achr9G03320_001 N 0.758
POPTR_0017s13950 Populus trichocarpa POPTR_0017s13950 N 0.758
LPERR12G13690 Leersia perrieri LPERR12G13690 N 0.757
BGIOSGA035973 Oryza indica BGIOSGA035973 N 0.751
Lus10025355.g Linum usitatissimum Lus10025355.g N 0.748
chr3.LjT11G09.160.nc Lotus japonicus chr3.LjT11G09.160.nc N 0.741
MTR_7g061550 Medicago truncatula MTR_7g061550 N 0.739
Ca_21130 Cicer arietinum Ca_21130 N 0.739
GLYMA07G15850 Glycine max GLYMA07G15850 N 0.739
GLYMA18G39771 Glycine max GLYMA18G39771 N 0.739
GSMUA_Achr7G10550_001 Musa acuminata GSMUA_Achr7G10550_001 N 0.729
SapurV1A.0101s0440 Salix purpurea SapurV1A.0101s0440 N 0.725
GSMUA_Achr9G28330_001 Musa acuminata GSMUA_Achr9G28330_001 N 0.720
mgf026281m Mimulus guttatus mgf026281m N 0.701