gene17750-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene17750-v1.0-hybrid T287327_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN

NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.888 0.957
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN

NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.668 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna17750.1-v1.0-hybrid Myb 197 247

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_018360 Aspergillus clavatus CADACLAG00001776 N 0.000
CADAFLAG00012650 Aspergillus flavus CADAFLAG00012650 N 0.000
AFUA_1G17150 Aspergillus fumigatus CADAFUAG00007199 N 0.000
CADANGAG00000957 Aspergillus niger CADANGAG00000957 N 0.000
ATEG_05079 Aspergillus terreus CADATEAG00003954 N 0.000
NFIA_008220 Neosartorya fischeri CADNFIAG00001798 N 0.000
EURHEDRAFT_373878 Aspergillus ruber EURHEDRAFT_373878 N 0.000
fgenesh1_pg.00042_#_76 Aspergillus carbonarius fgenesh1_pg.00042_#_76 N 0.000