gene19715-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene19715-v1.0-hybrid T287344_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.770 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna19715.1-v1.0-hybrid Myb 13 60
mrna19715.1-v1.0-hybrid Myb 66 112

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.004G268300 Gossypium raimondii Gorai.004G268300 I 0.808
Pm010927 Prunus mume Pm010927 I 0.802
cassava33147.m1 Manihot esculenta cassava33147.m1 I 0.791
orange1.1g039070m.g Citrus sinensis orange1.1g039070m.g I 0.782
Ciclev10018009m.g Citrus clementina Ciclev10018009m.g I 0.782
TCM_033645 Theobroma cacao TCM_033645 I 0.781
SapurV1A.4138s0010 Salix purpurea SapurV1A.4138s0010 I 0.777
SapurV1A.0149s0490 Salix purpurea SapurV1A.0149s0490 I 0.777
Cagra.5641s0037 Capsella grandiflora Cagra.5641s0037 I 0.770
ATY53 Arabidopsis thaliana AT3G12720 D 0.770
Bostr.3640s0047 Boechera stricta Bostr.3640s0047 I 0.770
Carubv10015099m.g Capsella rubella Carubv10015099m.g I 0.770
MDP0000157506 Malus domestica MDP0000157506 I 0.765
MDP0000226667 Malus domestica MDP0000226667 I 0.764
30125.m001257 Ricinus communis 30125.m001257 I 0.762
TCM_005977 Theobroma cacao TCM_005977 I 0.761
cassava44228.m1 Manihot esculenta cassava44228.m1 I 0.757
Ciclev10006752m.g Citrus clementina Ciclev10006752m.g I 0.756
orange1.1g036087m.g Citrus sinensis orange1.1g036087m.g I 0.756
ATY53 Arabidopsis lyrata scaffold_301452.1 I 0.754
Bra039339 Brassica rapa Bra039339 I 0.751
Bo1g138990 Brassica oleracea Bo1g138990 I 0.751
MTR_2g064160 Medicago truncatula MTR_2g064160 I 0.749
GLYMA08G17371 Glycine max GLYMA08G17371 I 0.749
POPTR_0008s08110 Populus trichocarpa POPTR_0008s08110 I 0.747
Thhalv10022066m.g Eutrema salsugineum Thhalv10022066m.g I 0.745
Bra034738 Brassica rapa Bra034738 I 0.745
Bo5g133210 Brassica oleracea Bo5g133210 I 0.745
Pm010847 Prunus mume Pm010847 I 0.744
PRUPE_ppa026618mg Prunus persica PRUPE_ppa026618mg I 0.744
27956.m000359 Ricinus communis 27956.m000359 I 0.744
PRUPE_ppa022859mg Prunus persica PRUPE_ppa022859mg I 0.738
Eucgr.E04323 Eucalyptus grandis Eucgr.E04323 I 0.737
SapurV1A.0122s0490 Salix purpurea SapurV1A.0122s0490 I 0.735
ATY53 Vitis vinifera VIT_19s0085g00940 I 0.726
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.723
gene19934-v1.0-hybrid Fragaria vesca gene19934-v1.0-hybrid I 0.722
Solyc02g082040.2 Solanum lycopersicum Solyc02g082040.2 I 0.722
SapurV1A.0236s0090 Salix purpurea SapurV1A.0236s0090 I 0.719
POPTR_0001s12240 Populus trichocarpa POPTR_0001s12240 I 0.719
cassava11527.m1 Manihot esculenta cassava11527.m1 I 0.718
POPTR_0003s15440 Populus trichocarpa POPTR_0003s15440 I 0.717
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I 0.713
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I 0.712
cassava26068.m1 Manihot esculenta cassava26068.m1 I 0.710
GLYMA15G41810 Glycine max GLYMA15G41810 I 0.704
LjT35F06.10.nd Lotus japonicus LjT35F06.10.nd I 0.703
AMTR_s00032p00221670 Amborella trichopoda AMTR_s00032p00221670 I 0.695
Solyc10g005240.2 Solanum lycopersicum Solyc10g005240.2 I 0.692
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.690
GSMUA_Achr8G03510_001 Musa acuminata GSMUA_Achr8G03510_001 I 0.684
POPTR_0010s18170 Populus trichocarpa POPTR_0010s18170 I 0.679
PGSC0003DMG400007325 Solanum tuberosum PGSC0003DMG400007325 I 0.677
Gorai.009G142200 Gossypium raimondii Gorai.009G142200 I 0.675
GLYMA15G02955 Glycine max GLYMA15G02955 I 0.674
MTR_8g017540 Medicago truncatula MTR_8g017540 I 0.671
mgf026023m Mimulus guttatus mgf026023m I 0.671
Ciclev10027201m.g Citrus clementina Ciclev10027201m.g I 0.671
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I 0.666
PK29171.1 Cannabis sativa PK29171.1 I 0.666
Thhalv10021042m.g Eutrema salsugineum Thhalv10021042m.g I 0.664
PK22855.1 Cannabis sativa PK22855.1 I 0.664
MDP0000148894 Malus domestica MDP0000148894 I 0.664
Pm013322 Prunus mume Pm013322 I 0.664
Lus10015608.g Linum usitatissimum Lus10015608.g I 0.664
TCM_029065 Theobroma cacao TCM_029065 I 0.664
PRUPE_ppa015032mg Prunus persica PRUPE_ppa015032mg I 0.664
GLYMA07G01050 Glycine max GLYMA07G01050 I 0.664
GLYMA08G20440 Glycine max GLYMA08G20440 I 0.664
Ca_02730 Cicer arietinum Ca_02730 I 0.664
Ca_10069 Cicer arietinum Ca_10069 I 0.664
Gorai.011G063900 Gossypium raimondii Gorai.011G063900 I 0.664
Eucgr.F03143 Eucalyptus grandis Eucgr.F03143 I 0.664
Bo1g134790 Brassica oleracea Bo1g134790 I 0.664
Bra021515 Brassica rapa Bra021515 I 0.664
GLYMA13G42431 Glycine max GLYMA13G42431 I 0.664
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.661
cassava34928.m1 Manihot esculenta cassava34928.m1 I 0.661
cassava176.valid.m1 Manihot esculenta cassava176.valid.m1 I 0.661
MYB26 Populus trichocarpa POPTR_0001s20370 I 0.661
MTR_8g017440 Medicago truncatula MTR_8g017440 I 0.661