gene23919-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene23919-v1.0-hybrid T287365_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna23919.1-v1.0-hybrid Myb 25 69

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000387366 Malus domestica MDP0000387366 N 0.868
30086.m000210 Ricinus communis 30086.m000210 N 0.866
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N 0.837
MDP0000216918 Malus domestica MDP0000216918 N 0.837
TCM_011327 Theobroma cacao TCM_011327 N 0.835
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N 0.835
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N 0.831
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N 0.831
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N 0.826
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N 0.826
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N 0.826
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N 0.826
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N 0.822
Gorai.008G172400 Gossypium raimondii Gorai.008G172400 N 0.818
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N 0.818
GLYMA12G32130 Glycine max GLYMA12G32130 N 0.807
29842.m003592 Ricinus communis 29842.m003592 N 0.806
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N 0.802
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N 0.802
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N 0.800
cassava11157.m1 Manihot esculenta cassava11157.m1 N 0.800
PK11198.1 Cannabis sativa PK11198.1 N 0.800
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N 0.800
VIT_10s0116g00500 Vitis vinifera VIT_10s0116g00500 N 0.799
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N 0.796
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N 0.794
MTR_4g046737 Medicago truncatula MTR_4g046737 N 0.794
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N 0.791
TCM_046858 Theobroma cacao TCM_046858 N 0.791
Gorai.002G083400 Gossypium raimondii Gorai.002G083400 N 0.783
29842.m003644 Ricinus communis 29842.m003644 N 0.783
Solyc07g052490.2 Solanum lycopersicum Solyc07g052490.2 N 0.781
mgf009009m Mimulus guttatus mgf009009m N 0.766
Pm009748 Prunus mume Pm009748 N 0.765
MDP0000499190 Malus domestica MDP0000499190 N 0.765
MDP0000270078 Malus domestica MDP0000270078 N 0.765
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N 0.765
cassava4691.m1 Manihot esculenta cassava4691.m1 N 0.762
Aquca_012_00145 Aquilegia coerulea Aquca_012_00145 N 0.752
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N 0.749
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.745
GLYMA12G10790 Glycine max GLYMA12G10790 N 0.743
GLYMA06G45941 Glycine max GLYMA06G45941 N 0.743
Gorai.010G252300 Gossypium raimondii Gorai.010G252300 N 0.733
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.721
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N 0.721
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.714
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.714
TCM_015351 Theobroma cacao TCM_015351 N 0.714
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.714
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.714
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N 0.712
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N 0.712
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N 0.711
Eucgr.K00803 Eucalyptus grandis Eucgr.K00803 N 0.699
SapurV1A.0610s0050 Salix purpurea SapurV1A.0610s0050 N 0.695
TCM_030163 Theobroma cacao TCM_030163 N 0.694
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.691
30169.m006531 Ricinus communis 30169.m006531 N 0.687
AMTR_s00057p00119300 Amborella trichopoda AMTR_s00057p00119300 N 0.684
ETC1 Arabidopsis thaliana AT1G01380 N 0.680
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.680
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.680
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.680
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.680
VIT_10s0116g01760 Vitis vinifera VIT_10s0116g01760 N 0.679
TCM_030224 Theobroma cacao TCM_030224 N 0.679
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N 0.676
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.665