gene25060-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene25060-v1.0-hybrid T287375_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna25060.1-v1.0-hybrid Myb 3 50
mrna25060.1-v1.0-hybrid Myb 56 131

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.723
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.718
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.712
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.710
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.706
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.706
Si008089m.g Setaria italica Si008089m.g I 0.705
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.703
TCM_037377 Theobroma cacao TCM_037377 I 0.702
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.700
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.697
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.697
PK16315.1 Cannabis sativa PK16315.1 I 0.694
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.693
TCM_037379 Theobroma cacao TCM_037379 I 0.689
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.686
Pm005572 Prunus mume Pm005572 I 0.686
MDP0000184538 Malus domestica MDP0000184538 I 0.685
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.683
TCM_004509 Theobroma cacao TCM_004509 I 0.680
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.680
Pm027047 Prunus mume Pm027047 I 0.680
Pm029489 Prunus mume Pm029489 I 0.679
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.678
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.677
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.677
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.677
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.677
Pm013279 Prunus mume Pm013279 I 0.677
TT2 Arabidopsis thaliana AT5G35550 I 0.677
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.677
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.677
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.677
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.677
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.677
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.677
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.674
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.673
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.672
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.672
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.671
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.670
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.670
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.669
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.669
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.667
TCM_037376 Theobroma cacao TCM_037376 I 0.667
MDP0000210851 Malus domestica MDP0000210851 I 0.667
MDP0000031172 Malus domestica MDP0000031172 I 0.667
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.667
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.667
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.667
Pm005570 Prunus mume Pm005570 I 0.667
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.667
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.667
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.667
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.667
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.666
Si038905m.g Setaria italica Si038905m.g I 0.666
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.664
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.663
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.663
TCM_037559 Theobroma cacao TCM_037559 I 0.663
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.663
TCM_000535 Theobroma cacao TCM_000535 I 0.663
Ca_03154 Cicer arietinum Ca_03154 I 0.662