CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene25982-v1.0-hybrid
(
Fragaria vesca
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
gene25982-v1.0-hybrid
T287383_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna25982.1-v1.0-hybrid
Myb
158
205
RGPWTPREDTLLTKYVEAHGHGLWRTLPKKAGLLRCGKSCRLRWMSYL
mrna25982.1-v1.0-hybrid
Myb
211
256
RGNITPDEDNLIIRMHSLLGNRWSLIAGRLPGRTDNDIKNYWNTNL
Links
Other
Myb/SANT
family TFs
Other
Fragaria vesca
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0014s09630
Populus trichocarpa
POPTR_0014s09630
I
0.760
SapurV1A.0013s0160
Salix purpurea
SapurV1A.0013s0160
I
0.760
POPTR_0002s17460
Populus trichocarpa
POPTR_0002s17460
I
0.745
Ca_01329
Cicer arietinum
Ca_01329
I
0.742
PK14784.1
Cannabis sativa
PK14784.1
I
0.739
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
0.739
MDP0000915330
Malus domestica
MDP0000915330
I
0.739
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
0.736
TCM_005112
Theobroma cacao
TCM_005112
I
0.736
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
0.736
Pm018338
Prunus mume
Pm018338
I
0.736
GLYMA07G05960
Glycine max
GLYMA07G05960
I
0.734
GLYMA16G02570
Glycine max
GLYMA16G02570
I
0.734
Ca_17627
Cicer arietinum
Ca_17627
I
0.733
cassava29820.valid.m1
Manihot esculenta
cassava29820.valid.m1
I
0.727
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
0.727
MTR_7g117730
Medicago truncatula
MTR_7g117730
I
0.725
evm.TU.supercontig_96.57
Carica papaya
evm.TU.supercontig_96.57
I
0.719
SapurV1A.0003s0900
Salix purpurea
SapurV1A.0003s0900
I
0.715
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
0.709
GLYMA19G44660
Glycine max
GLYMA19G44660
I
0.709
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
0.709
LjSGA_023691.1
Lotus japonicus
LjSGA_023691.1
I
0.708
SapurV1A.0059s0150
Salix purpurea
SapurV1A.0059s0150
I
0.706
POPTR_0003s14420
Populus trichocarpa
POPTR_0003s14420
I
0.706
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.706
POPTR_0001s11100
Populus trichocarpa
POPTR_0001s11100
I
0.706
chr1.CM0105.50.nd
Lotus japonicus
chr1.CM0105.50.nd
I
0.703
MDP0000157940
Malus domestica
MDP0000157940
I
0.701
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
0.700
Gorai.004G151000
Gossypium raimondii
Gorai.004G151000
I
0.699
cassava34176.m1
Manihot esculenta
cassava34176.m1
I
0.699
30068.m002544
Ricinus communis
30068.m002544
I
0.697
SapurV1A.0035s0040
Salix purpurea
SapurV1A.0035s0040
I
0.695
SapurV1A.0035s0030
Salix purpurea
SapurV1A.0035s0030
I
0.691
MTR_8g027345
Medicago truncatula
MTR_8g027345
I
0.689
AMTR_s00024p00250970
Amborella trichopoda
AMTR_s00024p00250970
I
0.686
PDK_20s1310471g002
Phoenix dactylifera
PDK_20s1310471g002
I
0.684
Gorai.004G130900
Gossypium raimondii
Gorai.004G130900
I
0.682
Solyc01g005660.1
Solanum lycopersicum
Solyc01g005660.1
I
0.679
PK23594.1
Cannabis sativa
PK23594.1
I
0.676
VIT_08s0007g07230
Vitis vinifera
VIT_08s0007g07230
I
0.675
SapurV1A.0081s0400
Salix purpurea
SapurV1A.0081s0400
I
0.674
POPTR_0003s21120
Populus trichocarpa
POPTR_0003s21120
I
0.674
evm.TU.supercontig_119.55
Carica papaya
evm.TU.supercontig_119.55
I
0.674
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.669
gene25098-v1.0-hybrid
Fragaria vesca
gene25098-v1.0-hybrid
I
0.668
Gorai.004G044000
Gossypium raimondii
Gorai.004G044000
I
0.666
orange1.1g040726m.g
Citrus sinensis
orange1.1g040726m.g
I
0.665
SapurV1A.1276s0050
Salix purpurea
SapurV1A.1276s0050
I
0.665
Ciclev10015648m.g
Citrus clementina
Ciclev10015648m.g
I
0.665
TCM_025910
Theobroma cacao
TCM_025910
I
0.665
cassava6348.valid.m1
Manihot esculenta
cassava6348.valid.m1
I
0.665
TCM_024180
Theobroma cacao
TCM_024180
I
0.665
PRUPE_ppa006730mg
Prunus persica
PRUPE_ppa006730mg
I
0.665
POPTR_0013s05300
Populus trichocarpa
POPTR_0013s05300
I
0.665
MDP0000791870
Malus domestica
MDP0000791870
I
0.665
cassava9274.m1
Manihot esculenta
cassava9274.m1
I
0.665
MDP0000723614
Malus domestica
MDP0000723614
I
0.665
MDP0000655330
Malus domestica
MDP0000655330
I
0.665
Gorai.007G350500
Gossypium raimondii
Gorai.007G350500
I
0.665
Eucgr.B03606
Eucalyptus grandis
Eucgr.B03606
I
0.665
mgf015598m
Mimulus guttatus
mgf015598m
I
0.661
TCM_015685
Theobroma cacao
TCM_015685
I
0.661