gene31098-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene31098-v1.0-hybrid T287414_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.666 0.677
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.661 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna31098.1-v1.0-hybrid Myb 20 67
mrna31098.1-v1.0-hybrid Myb 73 118

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000264051 Malus domestica MDP0000264051 I 0.882
Pm027586 Prunus mume Pm027586 I 0.867
evm.TU.supercontig_46.32 Carica papaya evm.TU.supercontig_46.32 I 0.863
MDP0000167314 Malus domestica MDP0000167314 I 0.861
Gorai.001G044000 Gossypium raimondii Gorai.001G044000 I 0.859
Eucgr.C01374 Eucalyptus grandis Eucgr.C01374 I 0.857
cassava32672.m1 Manihot esculenta cassava32672.m1 I 0.857
PRUPE_ppa016532mg Prunus persica PRUPE_ppa016532mg I 0.856
Cla016951 Citrullus lanatus Cla016951 I 0.854
PK01088.1 Cannabis sativa PK01088.1 I 0.849
TCM_038131 Theobroma cacao TCM_038131 I 0.848
MYB82 Arabidopsis thaliana AT5G52600 I 0.846
Carubv10028642m.g Capsella rubella Carubv10028642m.g I 0.846
Cagra.0084s0008 Capsella grandiflora Cagra.0084s0008 I 0.846
Bo2g047590 Brassica oleracea Bo2g047590 I 0.843
Bostr.7305s0011 Boechera stricta Bostr.7305s0011 I 0.841
Thhalv10014754m.g Eutrema salsugineum Thhalv10014754m.g I 0.835
Bra022602 Brassica rapa Bra022602 I 0.832
Cucsa.132300 Cucumis sativus Cucsa.132300 N 0.830
POPTR_0018s12780 Populus trichocarpa POPTR_0018s12780 N 0.829
Gorai.004G276500 Gossypium raimondii Gorai.004G276500 N 0.828
AtMYB82 Arabidopsis lyrata Al_scaffold_0008_1642 I 0.825
POPTR_0006s06530 Populus trichocarpa POPTR_0006s06530 N 0.819
mgf023205m Mimulus guttatus mgf023205m I 0.811
SapurV1A.0034s0330 Salix purpurea SapurV1A.0034s0330 N 0.805
Solyc07g008010.2 Solanum lycopersicum Solyc07g008010.2 I 0.804
PGSC0003DMG400030913 Solanum tuberosum PGSC0003DMG400030913 I 0.804
Bo3g023140 Brassica oleracea Bo3g023140 I 0.791
Bra029113 Brassica rapa Bra029113 I 0.791
SapurV1A.2191s0020 Salix purpurea SapurV1A.2191s0020 N 0.786
SapurV1A.0197s0090 Salix purpurea SapurV1A.0197s0090 N 0.786
VIT_11s0016g05660 Vitis vinifera VIT_11s0016g05660 N 0.763
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.726
cassava29820.valid.m1 Manihot esculenta cassava29820.valid.m1 I 0.719
Eucgr.B00866 Eucalyptus grandis Eucgr.B00866 I 0.717
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.714
VIT_11s0016g05690 Vitis vinifera VIT_11s0016g05690 N 0.709
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.708
GLYMA19G44660 Glycine max GLYMA19G44660 I 0.707
GLYMA20G32510 Glycine max GLYMA20G32510 I 0.706
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.701
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.697
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.696
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.695
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.695
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.693
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.693
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.690
PK05970.1 Cannabis sativa PK05970.1 I 0.688
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.687
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.687
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.686
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.685
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.685
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.685
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.684
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.684
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.683
GLYMA16G02570 Glycine max GLYMA16G02570 I 0.682
GLYMA07G05960 Glycine max GLYMA07G05960 I 0.682
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.681
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.680
Pm029489 Prunus mume Pm029489 I 0.680
Ca_01329 Cicer arietinum Ca_01329 I 0.680
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.679
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.679
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.678
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.677
MDP0000209761 Malus domestica MDP0000209761 I 0.677
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.675
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.675
LjSGA_023691.1 Lotus japonicus LjSGA_023691.1 I 0.675
chr1.CM0105.50.nd Lotus japonicus chr1.CM0105.50.nd I 0.675
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.675
POPTR_0002s17460 Populus trichocarpa POPTR_0002s17460 I 0.674
Pm005573 Prunus mume Pm005573 I 0.674
SapurV1A.0003s0900 Salix purpurea SapurV1A.0003s0900 I 0.674
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.674
e_gw1.6.239.1 Physcomitrella patens e_gw1.6.239.1 I 0.673
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.673
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.671
cassava6228.valid.m1 Manihot esculenta cassava6228.valid.m1 I 0.671
SapurV1A.0013s0160 Salix purpurea SapurV1A.0013s0160 I 0.671
Ca_06236 Cicer arietinum Ca_06236 I 0.671
POPTR_0014s09630 Populus trichocarpa POPTR_0014s09630 I 0.671
MDP0000184538 Malus domestica MDP0000184538 I 0.670
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.669
Pm027047 Prunus mume Pm027047 I 0.668
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.668
TCM_037377 Theobroma cacao TCM_037377 I 0.668
Ca_17627 Cicer arietinum Ca_17627 I 0.668
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.667
Pm025102 Prunus mume Pm025102 I 0.667
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.667
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.667
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.667
Si038905m.g Setaria italica Si038905m.g I 0.667
TT2 Arabidopsis thaliana AT5G35550 I 0.667
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.667
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.667
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.667
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.667
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.667
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.667
POPTR_0017s02990 Populus trichocarpa POPTR_0017s02990 I 0.667
Eucgr.B00865 Eucalyptus grandis Eucgr.B00865 I 0.667
TCM_012057 Theobroma cacao TCM_012057 I 0.666
Solyc08g082890.2 Solanum lycopersicum Solyc08g082890.2 I 0.666
PGSC0003DMG400012126 Solanum tuberosum PGSC0003DMG400012126 I 0.666
POPTR_0018s05740 Populus trichocarpa POPTR_0018s05740 I 0.666
TCM_037379 Theobroma cacao TCM_037379 I 0.666
Pm024725 Prunus mume Pm024725 I 0.666
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.666
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.665
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.665
POPTR_0004s18020 Populus trichocarpa POPTR_0004s18020 I 0.664
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.664
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.664
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.664
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.664
Solyc01g111500.2 Solanum lycopersicum Solyc01g111500.2 I 0.664
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.663
MTR_7g117730 Medicago truncatula MTR_7g117730 I 0.663
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.663
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.663
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.662
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.662
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.662
Bra025311 Brassica rapa Bra025311 I 0.662
Bra025589 Brassica rapa Bra025589 I 0.661
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.661
MYB23 Arabidopsis thaliana AT5G40330 D 0.661
TCM_019261 Theobroma cacao TCM_019261 I 0.661
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.661
VIT_14s0006g01620 Vitis vinifera VIT_14s0006g01620 I 0.661
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.661
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.661