Gorai.001G013000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G013000 T287441_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.675 0.787
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.675 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G013000.1 Myb 5 57
Gorai.001G013000.2 Myb 5 57
Gorai.001G013000.3 Myb 5 57

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_037620 Theobroma cacao TCM_037620 I 0.909
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.697
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.697
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.697
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I 0.685
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I 0.685
29912.m005376 Ricinus communis 29912.m005376 I 0.677
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.675
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.675
Aquca_001_00028 Aquilegia coerulea Aquca_001_00028 I 0.670
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.667
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.664
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.664
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.664
mgf007122m Mimulus guttatus mgf007122m I 0.664
Bo8g104830 Brassica oleracea Bo8g104830 I 0.662
Bo8g067280 Brassica oleracea Bo8g067280 I 0.662
Bra016598 Brassica rapa Bra016598 I 0.662