Gorai.001G030600 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G030600 T287448_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.757 0.872
ARR10
M02702_2.00 		Arabidopsis thaliana
AGATHYKN
NMRDATCT		 SELEX
Mathelier et al.(2014)
MA0121.1 		0.697 0.787
ARR10
M11045_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ARR10_01 		0.697 0.787
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.669 0.872
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.667 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G030600.1 Myb 210 260
Gorai.001G030600.2 Myb 204 254

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

356 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action