Gorai.002G230800 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.002G230800 T287501_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.909 1.000
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.675 0.702
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.675 0.702
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.666 0.660
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.666 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G230800.1 Myb 101 151
Gorai.002G230800.2 Myb 101 151
Gorai.002G230800.3 Myb 101 151
Gorai.002G230800.4 Myb 101 151
Gorai.002G230800.5 Myb 101 151
Gorai.002G230800.6 Myb 101 151

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action