Gorai.003G183700 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.003G183700 T287524_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.762 0.806
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.762 0.806
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.759 0.753
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.759 0.753
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.739 0.785
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.739 0.785
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.727 0.720
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.708 0.720
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.706 0.710
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.706 0.710
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.706 0.710
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW

WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.688 0.774
PK28187.1
M01286_2.00
Cannabis sativa
TACCTACC

GGTAGGTA
PBM
Lambert et al.(2019)
pTH11305
0.674 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G183700.1 Myb 15 62
Gorai.003G183700.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

847 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_062510 Aspergillus clavatus CADACLAG00005983 N 0.000
AFUA_3G01980 Aspergillus fumigatus CADAFUAG00000223 N 0.000
AFUA_3G12180 Aspergillus fumigatus CADAFUAG00005119 N 0.000
ANIA_05052 Aspergillus nidulans CADANIAG00005337 N 0.000
BAUCODRAFT_36555 Baudoinia compniacensis BAUCODRAFT_36555 N 0.000
CADAFLAG00002407 Aspergillus flavus CADAFLAG00002407 N 0.000
CADANGAG00005038 Aspergillus niger CADANGAG00005038 N 0.000
CADANGAG00011548 Aspergillus niger CADANGAG00011548 N 0.000
DOTSEDRAFT_131743 Dothistroma septosporum DOTSEDRAFT_131743 N 0.000
DOTSEDRAFT_147401 Dothistroma septosporum DOTSEDRAFT_147401 N 0.000
e_gw1.00866.217.1 Aspergillus carbonarius e_gw1.00866.217.1 N 0.000
fgenesh1_pm.00083_#_41 Aspergillus carbonarius fgenesh1_pm.00083_#_41 N 0.000
gw1.3.1196.1 Mycosphaerella graminicola gw1.3.1196.1 N 0.000
MYCFIDRAFT_203102 Pseudocercospora fijiensis MYCFIDRAFT_203102 N 0.000
Mycgr3G21552 Zymoseptoria tritici Mycgr3G21552 N 0.000
NFIA_003050 Neosartorya fischeri CADNFIAG00000049 N 0.000
OIDMADRAFT_125761 Oidiodendron maius OIDMADRAFT_125761 N 0.000
Pc21g12360 Penicillium chrysogenum Pc21g12360 N 0.000
Pc21g23810 Penicillium chrysogenum Pc21g23810 N 0.000
Pc23g00600 Penicillium chrysogenum Pc23g00600 N 0.000
PCH_Pc21g12360 Penicillium rubens PCH_Pc21g12360 N 0.000
PCH_Pc21g23810 Penicillium rubens PCH_Pc21g23810 N 0.000
PCH_Pc23g00600 Penicillium rubens PCH_Pc23g00600 N 0.000
PDE_04626 Penicillium oxalicum PDE_04626 N 0.000
PEX1_039490 Penicillium expansum PEX1_039490 N 0.000
PV09_04380 Verruconis gallopava PV09_04380 N 0.000
SEPMUDRAFT_148614 Sphaerulina musiva SEPMUDRAFT_148614 N 0.000
TRIATDRAFT_283211 Trichoderma atroviride TRIATDRAFT_283211 N 0.000
TRIVIDRAFT_134559 Trichoderma virens TRIVIDRAFT_134559 N 0.000
TSTA_019630 Talaromyces stipitatus TSTA_019630 N 0.000
TSTA_096880 Talaromyces stipitatus TSTA_096880 N 0.000