Gorai.004G060500 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.004G060500 T287529_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G060500.1 Myb 64 112
Gorai.004G060500.2 Myb 64 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.817
TCM_002550 Theobroma cacao TCM_002550 N 0.784
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.763
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.763
30005.m001261 Ricinus communis 30005.m001261 N 0.741
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.732
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.725
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.725
Bra040015 Brassica rapa Bra040015 N 0.725
Bra029658 Brassica rapa Bra029658 N 0.725
Bra001258 Brassica rapa Bra001258 N 0.725
Bo1g147290 Brassica oleracea Bo1g147290 N 0.725
Bo3g061340 Brassica oleracea Bo3g061340 N 0.725
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.714
mgf000871m Mimulus guttatus mgf000871m N 0.707
mgf025428m Mimulus guttatus mgf025428m N 0.701
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N 0.698
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.697
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.697
F775_32546 Aegilops tauschii F775_32546 N 0.697
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.688
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.684
OBART04G17310 Oryza barthii OBART04G17310 N 0.679
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.679
OLONG_009317 Oryza longistaminata OLONG_009317 N 0.679
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N 0.679
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.679
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.679
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.679
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.679
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.677
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.677
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.676
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.672
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.672
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.668
Si010917m.g Setaria italica Si010917m.g N 0.668
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.668
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.668