CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G196800
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.004G196800
T287551_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G196800.1
Myb
47
94
KGSWTAEEDRRLAKYIEIHGAKRWKTIAIKSGLNRCGKSCRLRWLNYL
Gorai.004G196800.1
Myb
100
145
RGNISDEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_015933
Theobroma cacao
TCM_015933
I
0.855
Eucgr.E00407
Eucalyptus grandis
Eucgr.E00407
N
0.853
PRUPE_ppa016135mg
Prunus persica
PRUPE_ppa016135mg
N
0.848
Pm023419
Prunus mume
Pm023419
N
0.848
gene08880-v1.0-hybrid
Fragaria vesca
gene08880-v1.0-hybrid
N
0.848
MDP0000253904
Malus domestica
MDP0000253904
N
0.840
MDP0000226215
Malus domestica
MDP0000226215
N
0.840
MDP0000133817
Malus domestica
MDP0000133817
I
0.831
MDP0000143276
Malus domestica
MDP0000143276
I
0.831
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
0.829
Cucsa.340790
Cucumis sativus
Cucsa.340790
N
0.827
Cla012784
Citrullus lanatus
Cla012784
N
0.827
GLYMA17G15270
Glycine max
GLYMA17G15270
I
0.817
VIT_00s0341g00050
Vitis vinifera
VIT_00s0341g00050
N
0.815
cassava33302.m1
Manihot esculenta
cassava33302.m1
I
0.812
cassava2804.m1
Manihot esculenta
cassava2804.m1
N
0.810
SapurV1A.0002s0910
Salix purpurea
SapurV1A.0002s0910
N
0.808
cassava9944.m1
Manihot esculenta
cassava9944.m1
I
0.804
cassava31571.valid.m1
Manihot esculenta
cassava31571.valid.m1
N
0.802
SapurV1A.0177s0330
Salix purpurea
SapurV1A.0177s0330
N
0.800
SapurV1A.4052s0010
Salix purpurea
SapurV1A.4052s0010
N
0.800
SapurV1A.0177s0340
Salix purpurea
SapurV1A.0177s0340
N
0.800
MDP0000124555
Malus domestica
MDP0000124555
N
0.799
TCM_029126
Theobroma cacao
TCM_029126
N
0.798
PRUPE_ppa024533mg
Prunus persica
PRUPE_ppa024533mg
N
0.797
Pm013277
Prunus mume
Pm013277
N
0.797
orange1.1g028843m.g
Citrus sinensis
orange1.1g028843m.g
N
0.795
Ciclev10022303m.g
Citrus clementina
Ciclev10022303m.g
N
0.795
evm.TU.supercontig_25.115
Carica papaya
evm.TU.supercontig_25.115
N
0.791
GLYMA01G41610
Glycine max
GLYMA01G41610
N
0.790
Gorai.009G146500
Gossypium raimondii
Gorai.009G146500
N
0.780
MDP0000931057
Malus domestica
MDP0000931057
N
0.780
gene07418-v1.0-hybrid
Fragaria vesca
gene07418-v1.0-hybrid
N
0.779
POPTR_0001s16970
Populus trichocarpa
POPTR_0001s16970
N
0.779
Eucgr.F04422
Eucalyptus grandis
Eucgr.F04422
N
0.779
Pm005577
Prunus mume
Pm005577
I
0.776
PRUPE_ppa026916mg
Prunus persica
PRUPE_ppa026916mg
I
0.776
VIT_09s0002g01380
Vitis vinifera
VIT_09s0002g01380
N
0.775
Eucgr.F04423
Eucalyptus grandis
Eucgr.F04423
N
0.774
GLYMA05G04900
Glycine max
GLYMA05G04900
I
0.772
VIT_04s0008g01870
Vitis vinifera
VIT_04s0008g01870
I
0.769
SapurV1A.1360s0110
Salix purpurea
SapurV1A.1360s0110
N
0.766
SapurV1A.1087s0090
Salix purpurea
SapurV1A.1087s0090
N
0.766
POPTR_0003s07680
Populus trichocarpa
POPTR_0003s07680
N
0.765
Aquca_011_00570
Aquilegia coerulea
Aquca_011_00570
N
0.764
evm.TU.supercontig_46.144
Carica papaya
evm.TU.supercontig_46.144
N
0.763
MDP0000261265
Malus domestica
MDP0000261265
I
0.762
POPTR_0003s06320
Populus trichocarpa
POPTR_0003s06320
N
0.761
mgf018735m
Mimulus guttatus
mgf018735m
N
0.761
TCM_037383
Theobroma cacao
TCM_037383
I
0.760
POPTR_0006s23780
Populus trichocarpa
POPTR_0006s23780
I
0.750
MTR_4g100720
Medicago truncatula
MTR_4g100720
N
0.750
SapurV1A.0710s0030
Salix purpurea
SapurV1A.0710s0030
I
0.750
Gorai.009G040800
Gossypium raimondii
Gorai.009G040800
N
0.749
GLYMA11G03770
Glycine max
GLYMA11G03770
N
0.743
POPTR_0018s08500
Populus trichocarpa
POPTR_0018s08500
N
0.741
Gorai.009G040900
Gossypium raimondii
Gorai.009G040900
N
0.736
SapurV1A.0435s0070
Salix purpurea
SapurV1A.0435s0070
N
0.735
Eucgr.C00725
Eucalyptus grandis
Eucgr.C00725
I
0.730
Ca_12762
Cicer arietinum
Ca_12762
N
0.729
Eucgr.B01869
Eucalyptus grandis
Eucgr.B01869
I
0.724
Eucgr.B01964
Eucalyptus grandis
Eucgr.B01964
I
0.717
gene15383-v1.0-hybrid
Fragaria vesca
gene15383-v1.0-hybrid
N
0.715
TRIUR3_09734
Triticum urartu
TRIUR3_09734
I
0.715
Traes_4DL_8A9D9ACCB
Triticum aestivum
Traes_4DL_8A9D9ACCB
I
0.707
Pm027048
Prunus mume
Pm027048
I
0.706
PRUPE_ppa017136mg
Prunus persica
PRUPE_ppa017136mg
I
0.706
F775_17212
Aegilops tauschii
F775_17212
I
0.705
F775_19148
Aegilops tauschii
F775_19148
I
0.704
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
0.704
Traes_4DL_26A958CDD
Triticum aestivum
Traes_4DL_26A958CDD
I
0.704
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
0.704
PRUPE_ppa015883mg
Prunus persica
PRUPE_ppa015883mg
I
0.701
Pm005573
Prunus mume
Pm005573
I
0.701
Gorai.013G114900
Gossypium raimondii
Gorai.013G114900
I
0.701
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.698
MDP0000887107
Malus domestica
MDP0000887107
I
0.695
Gorai.010G096800
Gossypium raimondii
Gorai.010G096800
N
0.693
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.692
MDP0000140609
Malus domestica
MDP0000140609
I
0.692
cassava25868.m1
Manihot esculenta
cassava25868.m1
I
0.692
GSMUA_Achr11G23500_001
Musa acuminata
GSMUA_Achr11G23500_001
N
0.692
Gorai.012G011700
Gossypium raimondii
Gorai.012G011700
N
0.691
mgf024953m
Mimulus guttatus
mgf024953m
N
0.689
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.688
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
0.686
GLYMA17G05831
Glycine max
GLYMA17G05831
I
0.686
GLYMA13G16890
Glycine max
GLYMA13G16890
I
0.686
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.685
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.684
AMTR_s00030p00146410
Amborella trichopoda
AMTR_s00030p00146410
I
0.684
28226.m000839
Ricinus communis
28226.m000839
I
0.682
orange1.1g028922m.g
Citrus sinensis
orange1.1g028922m.g
N
0.682
Ciclev10009521m.g
Citrus clementina
Ciclev10009521m.g
N
0.682
orange1.1g036591m.g
Citrus sinensis
orange1.1g036591m.g
I
0.679
Ciclev10026498m.g
Citrus clementina
Ciclev10026498m.g
I
0.679
GSMUA_Achr7G18550_001
Musa acuminata
GSMUA_Achr7G18550_001
I
0.678
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.678
GSMUA_Achr2G17960_001
Musa acuminata
GSMUA_Achr2G17960_001
N
0.678
PDK_20s13009436g002
Phoenix dactylifera
PDK_20s13009436g002
I
0.676
SapurV1A.0918s0130
Salix purpurea
SapurV1A.0918s0130
I
0.676
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.675
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.675
TCM_000535
Theobroma cacao
TCM_000535
I
0.674
GSMUA_Achr3G27700_001
Musa acuminata
GSMUA_Achr3G27700_001
I
0.673
POPTR_0001s04240
Populus trichocarpa
POPTR_0001s04240
I
0.673
SapurV1A.0059s0160
Salix purpurea
SapurV1A.0059s0160
I
0.673
GSMUA_Achr6G02530_001
Musa acuminata
GSMUA_Achr6G02530_001
I
0.672
Cucsa.304110
Cucumis sativus
Cucsa.304110
I
0.672
Cla011528
Citrullus lanatus
Cla011528
I
0.672
PDK_20s1554341g001
Phoenix dactylifera
PDK_20s1554341g001
I
0.671
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.671
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.669
cassava2758.m1
Manihot esculenta
cassava2758.m1
I
0.667
TCM_029121
Theobroma cacao
TCM_029121
I
0.667
TCM_037559
Theobroma cacao
TCM_037559
I
0.665
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.665
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.665
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.665
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.664
TCM_037379
Theobroma cacao
TCM_037379
I
0.664
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.664
gene12738-v1.0-hybrid
Fragaria vesca
gene12738-v1.0-hybrid
I
0.664
VIT_15s0046g00170
Vitis vinifera
VIT_15s0046g00170
I
0.664
cassava3467.m1
Manihot esculenta
cassava3467.m1
N
0.663
ATMYB2
Vitis vinifera
VIT_07s0005g01950
I
0.663
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.663
Lus10000470.g
Linum usitatissimum
Lus10000470.g
I
0.662
Lus10033438.g
Linum usitatissimum
Lus10033438.g
I
0.662
30068.m002544
Ricinus communis
30068.m002544
I
0.661
gene25685-v1.0-hybrid
Fragaria vesca
gene25685-v1.0-hybrid
I
0.661
Gorai.007G192900
Gossypium raimondii
Gorai.007G192900
I
0.661
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.661