Gorai.004G268300 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.004G268300 T287558_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.843 0.914
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.670 0.699
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.670 0.699
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.670 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G268300.1 Myb 13 60
Gorai.004G268300.1 Myb 66 111

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

244 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava33147.m1 Manihot esculenta cassava33147.m1 I 0.886
TCM_033645 Theobroma cacao TCM_033645 I 0.876
Pm010927 Prunus mume Pm010927 I 0.871
SapurV1A.0149s0490 Salix purpurea SapurV1A.0149s0490 I 0.864
SapurV1A.4138s0010 Salix purpurea SapurV1A.4138s0010 I 0.864
Bostr.3640s0047 Boechera stricta Bostr.3640s0047 I 0.860
30125.m001257 Ricinus communis 30125.m001257 I 0.860
cassava44228.m1 Manihot esculenta cassava44228.m1 I 0.847
TCM_005977 Theobroma cacao TCM_005977 I 0.845
ATY53 Arabidopsis lyrata scaffold_301452.1 I 0.845
Carubv10015099m.g Capsella rubella Carubv10015099m.g I 0.843
Cagra.5641s0037 Capsella grandiflora Cagra.5641s0037 I 0.843
ATY53 Arabidopsis thaliana AT3G12720 D 0.843
MDP0000157506 Malus domestica MDP0000157506 I 0.839
Ciclev10018009m.g Citrus clementina Ciclev10018009m.g I 0.839
orange1.1g039070m.g Citrus sinensis orange1.1g039070m.g I 0.839
GLYMA08G17371 Glycine max GLYMA08G17371 I 0.838
SapurV1A.0122s0490 Salix purpurea SapurV1A.0122s0490 I 0.837
orange1.1g036087m.g Citrus sinensis orange1.1g036087m.g I 0.837
Ciclev10006752m.g Citrus clementina Ciclev10006752m.g I 0.837
Thhalv10022066m.g Eutrema salsugineum Thhalv10022066m.g I 0.836
Bra034738 Brassica rapa Bra034738 I 0.836
Bo5g133210 Brassica oleracea Bo5g133210 I 0.836
Eucgr.E04323 Eucalyptus grandis Eucgr.E04323 I 0.835
MTR_2g064160 Medicago truncatula MTR_2g064160 I 0.835
POPTR_0008s08110 Populus trichocarpa POPTR_0008s08110 I 0.834
27956.m000359 Ricinus communis 27956.m000359 I 0.833
Bo1g138990 Brassica oleracea Bo1g138990 I 0.830
Bra039339 Brassica rapa Bra039339 I 0.830
MDP0000226667 Malus domestica MDP0000226667 I 0.826
ATY53 Vitis vinifera VIT_19s0085g00940 I 0.821
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I 0.814
Pm010847 Prunus mume Pm010847 I 0.814
PRUPE_ppa026618mg Prunus persica PRUPE_ppa026618mg I 0.814
POPTR_0003s15440 Populus trichocarpa POPTR_0003s15440 I 0.812
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.809
gene19715-v1.0-hybrid Fragaria vesca gene19715-v1.0-hybrid I 0.808
PRUPE_ppa022859mg Prunus persica PRUPE_ppa022859mg I 0.807
cassava11527.m1 Manihot esculenta cassava11527.m1 I 0.806
cassava26068.m1 Manihot esculenta cassava26068.m1 I 0.805
LjT35F06.10.nd Lotus japonicus LjT35F06.10.nd I 0.801
Solyc02g082040.2 Solanum lycopersicum Solyc02g082040.2 I 0.800
POPTR_0001s12240 Populus trichocarpa POPTR_0001s12240 I 0.795
GLYMA15G41810 Glycine max GLYMA15G41810 I 0.793
SapurV1A.0236s0090 Salix purpurea SapurV1A.0236s0090 I 0.785
gene19934-v1.0-hybrid Fragaria vesca gene19934-v1.0-hybrid I 0.782
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I 0.781
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.778
Solyc10g005240.2 Solanum lycopersicum Solyc10g005240.2 I 0.773
POPTR_0010s18170 Populus trichocarpa POPTR_0010s18170 I 0.766
PGSC0003DMG400007325 Solanum tuberosum PGSC0003DMG400007325 I 0.755
GLYMA15G02955 Glycine max GLYMA15G02955 I 0.752
MTR_8g017540 Medicago truncatula MTR_8g017540 I 0.749
PK29171.1 Cannabis sativa PK29171.1 I 0.747
mgf026023m Mimulus guttatus mgf026023m I 0.744
Cla012793 Citrullus lanatus Cla012793 I 0.743
Cucsa.340960 Cucumis sativus Cucsa.340960 I 0.743
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.742
GLYMA07G01050 Glycine max GLYMA07G01050 I 0.742
Ca_02730 Cicer arietinum Ca_02730 I 0.742
AMTR_s00032p00221670 Amborella trichopoda AMTR_s00032p00221670 I 0.742
PRUPE_ppa015032mg Prunus persica PRUPE_ppa015032mg I 0.742
TCM_029065 Theobroma cacao TCM_029065 I 0.742
GLYMA13G42431 Glycine max GLYMA13G42431 I 0.742
MYB26 Populus trichocarpa POPTR_0001s20370 I 0.742
MDP0000148894 Malus domestica MDP0000148894 I 0.742
Pm013322 Prunus mume Pm013322 I 0.742
Ca_10069 Cicer arietinum Ca_10069 I 0.742
Lus10015608.g Linum usitatissimum Lus10015608.g I 0.742
Gorai.011G063900 Gossypium raimondii Gorai.011G063900 I 0.742
GLYMA08G20440 Glycine max GLYMA08G20440 I 0.742
PK22855.1 Cannabis sativa PK22855.1 I 0.742
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I 0.741
MTR_8g017440 Medicago truncatula MTR_8g017440 I 0.739
cassava176.valid.m1 Manihot esculenta cassava176.valid.m1 I 0.739
Aquca_020_00444 Aquilegia coerulea Aquca_020_00444 I 0.738
Solyc03g121740.1 Solanum lycopersicum Solyc03g121740.1 I 0.735
Thhalv10021042m.g Eutrema salsugineum Thhalv10021042m.g I 0.733
Bra021515 Brassica rapa Bra021515 I 0.733
Eucgr.F03143 Eucalyptus grandis Eucgr.F03143 I 0.733
Bo1g134790 Brassica oleracea Bo1g134790 I 0.733
Gorai.009G142200 Gossypium raimondii Gorai.009G142200 I 0.731
GSMUA_Achr8G03510_001 Musa acuminata GSMUA_Achr8G03510_001 I 0.731
cassava34928.m1 Manihot esculenta cassava34928.m1 I 0.730
SapurV1A.1869s0040 Salix purpurea SapurV1A.1869s0040 I 0.729
SapurV1A.0538s0150 Salix purpurea SapurV1A.0538s0150 I 0.729
gene06920-v1.0-hybrid Fragaria vesca gene06920-v1.0-hybrid I 0.729
MTR_8g017500 Medicago truncatula MTR_8g017500 I 0.724
BGIOSGA004306 Oryza indica BGIOSGA004306 I 0.721
OLONG_008660 Oryza longistaminata OLONG_008660 I 0.721
ORGLA01G0234600 Oryza glaberrima ORGLA01G0234600 I 0.721
OS01G0709000 Oryza sativa OS01G0709000 I 0.721
AMTR_s00079p00143780 Amborella trichopoda AMTR_s00079p00143780 I 0.719
GSMUA_Achr9G25110_001 Musa acuminata GSMUA_Achr9G25110_001 I 0.719
OS07G0497500 Oryza sativa OS07G0497500 I 0.718
GRMZM2G172327 Zea mays GRMZM2G172327 I 0.718
Sb02g033830 Sorghum bicolor Sb02g033830 I 0.718
Ciclev10027201m.g Citrus clementina Ciclev10027201m.g I 0.718
ORGLA07G0124200 Oryza glaberrima ORGLA07G0124200 I 0.718
Si030152m.g Setaria italica Si030152m.g I 0.718
ORUFI07G15620 Oryza rufipogon ORUFI07G15620 I 0.718
Pavir.Bb02786 Panicum virgatum Pavir.Bb02786 I 0.718
OMERI07G11910 Oryza meridionalis OMERI07G11910 I 0.718
OBART07G15150 Oryza barthii OBART07G15150 I 0.718
BGIOSGA024270 Oryza indica BGIOSGA024270 I 0.718
Pavir.Ba00923 Panicum virgatum Pavir.Ba00923 I 0.718
LPERR07G12760 Leersia perrieri LPERR07G12760 I 0.718
OPUNC07G13970 Oryza punctata OPUNC07G13970 I 0.718
BRADI1G61397 Brachypodium distachyon BRADI1G61397 I 0.713
LPERR01G24370 Leersia perrieri LPERR01G24370 I 0.712
Traes_2AS_40FA27AE7 Triticum aestivum Traes_2AS_40FA27AE7 I 0.712
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.712
MTR_2g099740 Medicago truncatula MTR_2g099740 I 0.712
OB01G37410 Oryza brachyantha OB01G37410 I 0.712
OPUNC01G28160 Oryza punctata OPUNC01G28160 I 0.712
evm.TU.supercontig_25.69 Carica papaya evm.TU.supercontig_25.69 I 0.712
F775_00835 Aegilops tauschii F775_00835 I 0.712
TRIUR3_26358 Triticum urartu TRIUR3_26358 I 0.712
BRADI2G47887 Brachypodium distachyon BRADI2G47887 I 0.712
Si002319m.g Setaria italica Si002319m.g I 0.709
MTR_8g017350 Medicago truncatula MTR_8g017350 I 0.709
MYB26 Vitis vinifera VIT_09s0002g01670 I 0.708
Pavir.Ea02594 Panicum virgatum Pavir.Ea02594 I 0.706
Sb03g032600 Sorghum bicolor Sb03g032600 I 0.706
MTR_8g017340 Medicago truncatula MTR_8g017340 I 0.705
PGSC0003DMG400037038 Solanum tuberosum PGSC0003DMG400037038 I 0.705
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I 0.703
Carubv10015767m.g Capsella rubella Carubv10015767m.g I 0.703
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I 0.703
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I 0.703
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I 0.703
MYB26 Arabidopsis thaliana AT3G13890 I 0.703
OB07G21090 Oryza brachyantha OB07G21090 I 0.694
MDP0000158937 Malus domestica MDP0000158937 I 0.692
GSMUA_Achr7G17250_001 Musa acuminata GSMUA_Achr7G17250_001 I 0.689
Traes_2BS_CA02DC5B2 Triticum aestivum Traes_2BS_CA02DC5B2 I 0.688
MTR_8g017390 Medicago truncatula MTR_8g017390 I 0.687
Pavir.J21520 Panicum virgatum Pavir.J21520 I 0.685
MTR_3g074520 Medicago truncatula MTR_3g074520 I 0.683
Eucgr.B00023 Eucalyptus grandis Eucgr.B00023 I 0.683
GLYMA06G10840 Glycine max GLYMA06G10840 I 0.683
Carubv10020714m.g Capsella rubella Carubv10020714m.g I 0.683
Cagra.10702s0006 Capsella grandiflora Cagra.10702s0006 I 0.683
LPERR08G03020 Leersia perrieri LPERR08G03020 I 0.680
GRMZM2G325907 Zea mays GRMZM2G325907 I 0.680
BGIOSGA027659 Oryza indica BGIOSGA027659 I 0.680
OS08G0151300 Oryza sativa OS08G0151300 I 0.680
OMERI08G02950 Oryza meridionalis OMERI08G02950 I 0.680
ONIVA06G02400 Oryza nivara ONIVA06G02400 I 0.680
ORUFI08G03380 Oryza rufipogon ORUFI08G03380 I 0.680
ORGLA08G0023900 Oryza glaberrima ORGLA08G0023900 I 0.680
Pavir.Fb00364 Panicum virgatum Pavir.Fb00364 I 0.680
OGLUM08G03030 Oryza glumaepatula OGLUM08G03030 I 0.680
OB08G13090 Oryza brachyantha OB08G13090 I 0.680
Sb07g003320 Sorghum bicolor Sb07g003320 I 0.680
Eucgr.I00442 Eucalyptus grandis Eucgr.I00442 I 0.680
OBART08G03020 Oryza barthii OBART08G03020 I 0.680
Pavir.J29561 Panicum virgatum Pavir.J29561 I 0.680
Solyc04g056310.2 Solanum lycopersicum Solyc04g056310.2 I 0.680
Traes_3AL_E3BF20F0D Triticum aestivum Traes_3AL_E3BF20F0D I 0.679
F775_17110 Aegilops tauschii F775_17110 I 0.679
OB06G17320 Oryza brachyantha OB06G17320 I 0.679
TRIUR3_25230 Triticum urartu TRIUR3_25230 I 0.679
MLOC_18177 Hordeum vulgare MLOC_18177 I 0.679
GRMZM2G088783 Zea mays GRMZM2G088783 I 0.679
mgf024107m Mimulus guttatus mgf024107m I 0.675
Sb02g040480 Sorghum bicolor Sb02g040480 I 0.674
Lus10038395.g Linum usitatissimum Lus10038395.g I 0.674
GLYMA04G11040 Glycine max GLYMA04G11040 I 0.674
GLYMA02G13770 Glycine max GLYMA02G13770 I 0.673
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.672
MDP0000263595 Malus domestica MDP0000263595 I 0.672
MYB107 Arabidopsis thaliana AT3G02940 D 0.670
AtMYB17 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002102 I 0.670
Bra021382 Brassica rapa Bra021382 I 0.670
Bo1g155040 Brassica oleracea Bo1g155040 I 0.670
Thhalv10022405m.g Eutrema salsugineum Thhalv10022405m.g I 0.670
Carubv10016434m.g Capsella rubella Carubv10016434m.g I 0.670
Cagra.1194s0007 Capsella grandiflora Cagra.1194s0007 I 0.670
MYB107 Arabidopsis lyrata fgenesh2_kg.3__241__AT3G02940.1 I 0.670
AtMYB17 Arabidopsis thaliana AT3G61250 D 0.670
Bostr.19046s0006 Boechera stricta Bostr.19046s0006 I 0.670
Bra032028 Brassica rapa Bra032028 I 0.670
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.668
Sb03g024500 Sorghum bicolor Sb03g024500 I 0.667
OMERI05G21780 Oryza meridionalis OMERI05G21780 I 0.667
Pavir.J20716 Panicum virgatum Pavir.J20716 I 0.667
GRMZM2G150841 Zea mays GRMZM2G150841 I 0.667
Pavir.J18139 Panicum virgatum Pavir.J18139 I 0.667
OPUNC01G19230 Oryza punctata OPUNC01G19230 I 0.667
OS05G0543600 Oryza sativa OS05G0543600 I 0.667
BGIOSGA020297 Oryza indica BGIOSGA020297 I 0.667
ORGLA05G0210500 Oryza glaberrima ORGLA05G0210500 I 0.667
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.666
Solyc01g094360.2 Solanum lycopersicum Solyc01g094360.2 I 0.666
F775_28951 Aegilops tauschii F775_28951 I 0.666
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.666
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.666
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.666
ORGLA07G0264800 Oryza glaberrima ORGLA07G0264800 I 0.665
OPUNC07G22080 Oryza punctata OPUNC07G22080 I 0.665
OMERI03G17220 Oryza meridionalis OMERI03G17220 I 0.665
OGLUM07G23470 Oryza glumaepatula OGLUM07G23470 I 0.665
OMERI07G19830 Oryza meridionalis OMERI07G19830 I 0.665
ONIVA02G07540 Oryza nivara ONIVA02G07540 I 0.665
BGIOSGA010658 Oryza indica BGIOSGA010658 I 0.665
Pavir.J03230 Panicum virgatum Pavir.J03230 I 0.665
MLOC_37780 Hordeum vulgare MLOC_37780 I 0.665
BGIOSGA026208 Oryza indica BGIOSGA026208 I 0.665
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.665
Bo5g150350 Brassica oleracea Bo5g150350 I 0.665
ORUFI07G24600 Oryza rufipogon ORUFI07G24600 I 0.665
F775_18488 Aegilops tauschii F775_18488 I 0.665
Traes_7AL_0BCF482E8 Triticum aestivum Traes_7AL_0BCF482E8 I 0.665
TRIUR3_20789 Triticum urartu TRIUR3_20789 I 0.665
Traes_7DL_AD4395F8F Triticum aestivum Traes_7DL_AD4395F8F I 0.665
GSMUA_Achr5G18080_001 Musa acuminata GSMUA_Achr5G18080_001 I 0.665
Si036638m.g Setaria italica Si036638m.g I 0.665
Si029872m.g Setaria italica Si029872m.g I 0.665
LPERR07G20400 Leersia perrieri LPERR07G20400 I 0.665
GRMZM2G147698 Zea mays GRMZM2G147698 I 0.665
Sb01g034270 Sorghum bicolor Sb01g034270 I 0.665
BRADI2G40620 Brachypodium distachyon BRADI2G40620 I 0.664
GRMZM2G064744 Zea mays GRMZM2G064744 I 0.664
OPUNC08G02760 Oryza punctata OPUNC08G02760 I 0.663
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.663
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.663
GSMUA_Achr1G25120_001 Musa acuminata GSMUA_Achr1G25120_001 I 0.663
PGSC0003DMG400000027 Solanum tuberosum PGSC0003DMG400000027 I 0.663
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.662
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.662
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.662
Ciclev10003958m.g Citrus clementina Ciclev10003958m.g I 0.662
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.662
TCM_001102 Theobroma cacao TCM_001102 I 0.662
orange1.1g037998m.g Citrus sinensis orange1.1g037998m.g I 0.662
BRADI1G26920 Brachypodium distachyon BRADI1G26920 I 0.662
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.662
Gorai.003G039500 Gossypium raimondii Gorai.003G039500 I 0.662
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.662
TCM_034902 Theobroma cacao TCM_034902 I 0.662
Sb09g027200 Sorghum bicolor Sb09g027200 I 0.661
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.661
Ciclev10003251m.g Citrus clementina Ciclev10003251m.g I 0.661